RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 FCGRTP55899 365 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 PRRT2Q7Z6L0 340 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-209ENST00000473421 LRCH3Q96II8 777 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 PARK7Q99497 189 aaKnown RBP15.8■□□□□ 0.12
TRAF4-209ENST00000473421 AFG3L2Q9Y4W6 797 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 PTPRFP10586 1907 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 ALPK3Q96L96 1907 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 PHIPQ8WWQ0 1821 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 RFX7Q2KHR2 1363 aa15.79■□□□□ 0.12
TRAF4-209ENST00000473421 ADCY3O60266 1144 aa15.79■□□□□ 0.12
TRAF4-209ENST00000473421 INHAP05111 366 aa15.79■□□□□ 0.12
TRAF4-209ENST00000473421 LDHBP07195 334 aaKnown RBP15.79■□□□□ 0.12
TRAF4-209ENST00000473421 GADL1Q6ZQY3 521 aa15.79■□□□□ 0.12
TRAF4-209ENST00000473421 SCYL3Q8IZE3 742 aa15.79■□□□□ 0.12
TRAF4-209ENST00000473421 NKX2-3Q8TAU0 364 aa15.79■□□□□ 0.12
TRAF4-209ENST00000473421 DIS3LQ8TF46 1054 aaKnown RBP15.79■□□□□ 0.12
TRAF4-209ENST00000473421 PA2G4Q9UQ80 394 aaKnown RBP15.79■□□□□ 0.12
TRAF4-209ENST00000473421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-209ENST00000473421 MYH2Q9UKX2 1941 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 FAM196BA6NMK8 535 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
TRAF4-209ENST00000473421 MAP3K10Q02779 954 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 ATP2B3Q16720 1220 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 ZNF384Q8TF68 577 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 DEFB118Q96PH6 123 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 STAP2Q9UGK3 403 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 DOCK2Q92608 1830 aa15.78■□□□□ 0.12
TRAF4-209ENST00000473421 TRIM75PA6NK02 468 aa15.77■□□□□ 0.12
TRAF4-209ENST00000473421 UBXN2AP68543 259 aa15.77■□□□□ 0.12
TRAF4-209ENST00000473421 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
TRAF4-209ENST00000473421 TREML2Q5T2D2 321 aa15.77■□□□□ 0.12
TRAF4-209ENST00000473421 SLAIN1Q8ND83 568 aa15.77■□□□□ 0.12
TRAF4-209ENST00000473421 HTATIP2Q9BUP3 242 aa15.77■□□□□ 0.12
TRAF4-209ENST00000473421 IDI2Q9BXS1 227 aa15.77■□□□□ 0.12
TRAF4-209ENST00000473421 GAKO14976 1311 aa15.76■□□□□ 0.11
TRAF4-209ENST00000473421 PTPRCP08575 1304 aa15.76■□□□□ 0.11
TRAF4-209ENST00000473421 SALL1Q9NSC2 1324 aa15.76■□□□□ 0.11
TRAF4-209ENST00000473421 PEX10O60683 326 aa15.76■□□□□ 0.11
TRAF4-209ENST00000473421 TRIM32Q13049 653 aa15.76■□□□□ 0.11
TRAF4-209ENST00000473421 ANKRD13CQ8N6S4 541 aa15.76■□□□□ 0.11
TRAF4-209ENST00000473421 TFRCP02786 760 aaKnown RBP15.75■□□□□ 0.11
TRAF4-209ENST00000473421 TIMM10P62072 90 aa15.75■□□□□ 0.11
TRAF4-209ENST00000473421 PICALMQ13492 652 aa15.75■□□□□ 0.11
TRAF4-209ENST00000473421 RASGRF1Q13972 1273 aa15.75■□□□□ 0.11
TRAF4-209ENST00000473421 CCDC102BQ68D86 513 aa15.75■□□□□ 0.11
TRAF4-209ENST00000473421 ZSCAN29Q8IWY8 852 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-209ENST00000473421 PAWRQ96IZ0 340 aaKnown RBP15.75■□□□□ 0.11
TRAF4-209ENST00000473421 PAK6Q9NQU5 681 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-209ENST00000473421 PICK1Q9NRD5 415 aa15.75■□□□□ 0.11
TRAF4-209ENST00000473421 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
TRAF4-209ENST00000473421 DOCK1Q14185 1865 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 TNPO2O14787 897 aaKnown RBP15.74■□□□□ 0.11
TRAF4-209ENST00000473421 ANP32CO43423 234 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 ENTPD3O75355 529 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-209ENST00000473421 FASTKD5Q7L8L6 764 aaKnown RBP15.74■□□□□ 0.11
TRAF4-209ENST00000473421 PXYLP1Q8TE99 480 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 CDCA7LQ96GN5 454 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 CRISPLD2Q9H0B8 497 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 CEP126Q9P2H0 1117 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 NR2E3Q9Y5X4 410 aa15.74■□□□□ 0.11
TRAF4-209ENST00000473421 EVI5O60447 810 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 CIAO1O76071 339 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 BTDP43251 543 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 RHBDL3P58872 404 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 IRF5Q13568 498 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 PI16Q6UXB8 463 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 ABCF2Q9UG63 623 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 DENND2AQ9ULE3 1009 aa15.73■□□□□ 0.11
TRAF4-209ENST00000473421 LRRFIP2Q9Y608 721 aaKnown RBP15.73■□□□□ 0.11
TRAF4-209ENST00000473421 DLL1O00548 723 aa15.72■□□□□ 0.11
TRAF4-209ENST00000473421 CTNND1O60716 968 aaKnown RBP15.72■□□□□ 0.11
TRAF4-209ENST00000473421 SLC17A8Q8NDX2 589 aa15.72■□□□□ 0.11
TRAF4-209ENST00000473421 SMCR8Q8TEV9 937 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-209ENST00000473421 AGTPBP1Q9UPW5 1226 aa15.72■□□□□ 0.11
TRAF4-209ENST00000473421 SLC45A1Q9Y2W3 748 aa15.72■□□□□ 0.11
TRAF4-209ENST00000473421 JAG1P78504 1218 aa15.71■□□□□ 0.11
TRAF4-209ENST00000473421 MECOMQ03112 1051 aa15.71■□□□□ 0.11
TRAF4-209ENST00000473421 SLFN5Q08AF3 891 aa15.71■□□□□ 0.11
TRAF4-209ENST00000473421 SPP2Q13103 211 aa15.71■□□□□ 0.11
TRAF4-209ENST00000473421 SHROOM1Q2M3G4 852 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-209ENST00000473421 TBC1D9Q6ZT07 1266 aa15.71■□□□□ 0.11
TRAF4-209ENST00000473421 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-209ENST00000473421 GNL3LQ9NVN8 582 aaKnown RBP15.71■□□□□ 0.11
TRAF4-209ENST00000473421 GJD2Q9UKL4 321 aa15.71■□□□□ 0.11
TRAF4-209ENST00000473421 ZMYND8Q9ULU4 1186 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-209ENST00000473421 PLXNB2O15031 1838 aa15.71■□□□□ 0.1
TRAF4-209ENST00000473421 SEMA3EO15041 775 aa15.7■□□□□ 0.1
TRAF4-209ENST00000473421 UBTFL1P0CB47 393 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-209ENST00000473421 DZIP1Q86YF9 867 aaKnown RBP15.7■□□□□ 0.1
TRAF4-209ENST00000473421 MEIS3Q99687 375 aa15.7■□□□□ 0.1
TRAF4-209ENST00000473421 GDF15Q99988 308 aa15.7■□□□□ 0.1
TRAF4-209ENST00000473421 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.15e-7■■■□□ 18.2
TRAF4-209ENST00000473421 MROH7-TTC4A0A0A0MT08 1334 aa15.69■□□□□ 0.1
TRAF4-209ENST00000473421 GPR75-ASB3A0A0A6YYF3 556 aa15.69■□□□□ 0.1
TRAF4-209ENST00000473421 SYN1P17600 705 aa15.69■□□□□ 0.1
TRAF4-209ENST00000473421 IL15P40933 162 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-209ENST00000473421 TFCP2Q12800 502 aa15.69■□□□□ 0.1
TRAF4-209ENST00000473421 Q7L0L9 218 aa15.69■□□□□ 0.1
TRAF4-209ENST00000473421 C7orf61Q8IZ16 206 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms