RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.53
APTX-216ENST00000472896 FILIP1Q7Z7B0 1213 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 TSPYL6Q8N831 410 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 CBX8Q9HC52 389 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
APTX-216ENST00000472896 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 PALD1Q9ULE6 856 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 PTPRCP08575 1304 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
APTX-216ENST00000472896 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 CACTINQ8WUQ7 758 aaKnown RBP11.76□□□□□ -0.53
APTX-216ENST00000472896 ZNF296Q8WUU4 475 aaPredicted RBP11.76□□□□□ -0.53
APTX-216ENST00000472896 ZNF592Q92610 1267 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 MRFAP1L1Q96HT8 127 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 ANO2Q9NQ90 1003 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
APTX-216ENST00000472896 SH3TC1Q8TE82 1336 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 SALL3Q9BXA9 1300 aa11.76□□□□□ -0.53
APTX-216ENST00000472896 TPM1P09493 284 aa11.75□□□□□ -0.53
APTX-216ENST00000472896 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
APTX-216ENST00000472896 ZSCAN31Q96LW9 406 aaPredicted RBP11.75□□□□□ -0.53
APTX-216ENST00000472896 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
APTX-216ENST00000472896 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
APTX-216ENST00000472896 FHOD1Q9Y613 1164 aa11.75□□□□□ -0.53
APTX-216ENST00000472896 UBE2Q2LH0YL09 131 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 MMP14P50281 582 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 SCARF1Q14162 830 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 ANGEL2Q5VTE6 544 aaKnown RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 NOL8Q76FK4 1167 aaKnown RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 TTC14Q96N46 770 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 R3HDMLQ9H3Y0 253 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 TSPYL4Q9UJ04 414 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 HDAC9Q9UKV0 1011 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 TCHHQ07283 1943 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 SCN9AQ15858 1988 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 ZNF280AP59817 542 aaPredicted RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 KRT85P78386 507 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 SF3B3Q15393 1217 aaKnown RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 PRAMEF18Q5VWM3 479 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 LUZP1Q86V48 1076 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 GOLGA6L1Q8N7Z2 621 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 FAM89AQ96GI7 184 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 CHMP4AQ9BY43 222 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 TNMDQ9H2S6 317 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
APTX-216ENST00000472896 PSD3Q9NYI0 1048 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 NRBP1Q9UHY1 535 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
APTX-216ENST00000472896 LRRC37AA6NMS7 1700 aa11.73□□□□□ -0.53
APTX-216ENST00000472896 PNMA6AP0CW24 399 aaPredicted RBP11.73□□□□□ -0.53
APTX-216ENST00000472896 CASQ1P31415 396 aa11.73□□□□□ -0.53
APTX-216ENST00000472896 PLA2G4AP47712 749 aa11.73□□□□□ -0.53
APTX-216ENST00000472896 KCNJ6P48051 423 aa11.73□□□□□ -0.53
APTX-216ENST00000472896 GSDMDP57764 484 aa11.73□□□□□ -0.53
APTX-216ENST00000472896 ANO6Q4KMQ2 910 aa11.73□□□□□ -0.53
APTX-216ENST00000472896 CLSTN2Q9H4D0 955 aa11.73□□□□□ -0.53
APTX-216ENST00000472896 GPR25O00155 361 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 ZRANB2O95218 330 aaKnown RBP eCLIP11.72□□□□□ -0.53
APTX-216ENST00000472896 DNM1Q05193 864 aaKnown RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 HABP4Q5JVS0 413 aaKnown RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 TMCO3Q6UWJ1 677 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 CCAR2Q8N163 923 aaKnown RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 SRRTQ9BXP5 876 aaKnown RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 UPF3BQ9BZI7 483 aaKnown RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 RSPH14Q9UHP6 348 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 ATP5J2-PTCD1G3V325 749 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 SKILP12757 684 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 TM4SF4P48230 202 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 KRT24Q2M2I5 525 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 FBXO46Q6PJ61 603 aaPredicted RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 GMLQ99445 158 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 EYA3Q99504 573 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 UBXN6Q9BZV1 441 aa11.72□□□□□ -0.53
APTX-216ENST00000472896 SCAND2PQ9GZW5 306 aaPredicted RBP11.72□□□□□ -0.53
APTX-216ENST00000472896 GOLGA6L19H0YKK7 550 aa11.71□□□□□ -0.54
APTX-216ENST00000472896 ZNF165P49910 485 aa11.71□□□□□ -0.54
APTX-216ENST00000472896 CLCN6P51797 869 aa11.71□□□□□ -0.54
APTX-216ENST00000472896 GTF2A1P52655 376 aaPredicted RBP11.71□□□□□ -0.54
APTX-216ENST00000472896 FKBP1BP68106 108 aa11.71□□□□□ -0.54
APTX-216ENST00000472896 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.54
APTX-216ENST00000472896 ICE2Q659A1 982 aa11.71□□□□□ -0.54
APTX-216ENST00000472896 GOLGA5Q8TBA6 731 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms