RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 SART3Q15020 963 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 SF3A1Q15459 793 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 KRT27Q7Z3Y8 459 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 FBXO18Q8NFZ0 1043 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 PPP1R9BQ96SB3 815 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 SLC26A6Q9BXS9 759 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 ZMYM6O95789 1325 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 COL1A1P02452 1464 aaPredicted RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 ESPNB1AK53 854 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 SERPINB2P05120 415 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 PTMAP06454 111 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 MAP3K11Q16584 847 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 PRR5LQ6MZQ0 368 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 CCAR1Q8IX12 1150 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 ZNF384Q8TF68 577 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 RIOK1Q9BRS2 568 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 UBAC1Q9BSL1 405 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 USP25Q9UHP3 1055 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 WDR19Q8NEZ3 1342 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 ARAP2Q8WZ64 1704 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 USP17L12C9JPN9 530 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 USP17L21D6R901 530 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 CDKL5O76039 1030 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 CCDC192P0DO97 292 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 GYS1P13807 737 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 EVX2Q03828 476 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 GRAPQ13588 217 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 STK38Q15208 465 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 DZIP1Q86YF9 867 aaKnown RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 GRAPLQ8TC17 118 aaPredicted RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 STAG1Q8WVM7 1258 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 NSUN4Q96CB9 384 aaKnown RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 RNF41Q9H4P4 317 aaPredicted RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 ZNF219Q9P2Y4 722 aaPredicted RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 CLIC4Q9Y696 253 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 LAMA2P24043 3122 aaKnown RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 LAMB2P55268 1798 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 KIF28PB7ZC32 967 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 LIFRP42702 1097 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 ST5P78524 1137 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 SSRP1Q08945 709 aaKnown RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 TRIM29Q14134 588 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 ESR2Q92731 530 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 RGS17Q9UGC6 210 aaPredicted RBP5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 RCOR1Q9UKL0 485 aa5.66□□□□□ -1.5
TM4SF1-202ENST00000472441 RGL2O15211 777 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 RTN1Q16799 776 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 KRT40Q6A162 431 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 CTR9Q6PD62 1173 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 SASS6Q6UVJ0 657 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 CCDC73Q6ZRK6 1079 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 SGMS1Q86VZ5 419 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 FBXW7Q969H0 707 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 FAM217BQ9NTX9 383 aaPredicted RBP5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 DDX19AQ9NUU7 478 aaKnown RBP5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 TNKSO95271 1327 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 DNAH12Q6ZR08 3092 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 C4BP0C0L5 1744 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 A0A1B0GVL5 298 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 SEMA3EO15041 775 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 UFL1O94874 794 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 LDHBP07195 334 aaKnown RBP5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 CYP2D6P10635 497 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 MSNP26038 577 aaKnown RBP5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 MARCKSP29966 332 aaPredicted RBP5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 GUCY1A2P33402 732 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 GPSM2P81274 684 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 TYRO3Q06418 890 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 TXNRD1Q16881 649 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 FAM47AQ5JRC9 791 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 MYSM1Q5VVJ2 828 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 FSIP1Q8NA03 581 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 ERCC4Q92889 916 aaPredicted RBP5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 FUCA2Q9BTY2 467 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 CRNKL1Q9BZJ0 848 aaKnown RBP5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 GOLPH3LQ9H4A5 285 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 PCDHA7Q9UN72 937 aa5.65□□□□□ -1.5
TM4SF1-202ENST00000472441 DOCK2Q92608 1830 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 SCN7AQ01118 1682 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 CASZ1Q86V15 1759 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 hCG_1642624A0A1W2PR95 340 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 C6orf229H3BNL8 230 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 NPM3O75607 178 aaKnown RBP5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 ATP2B1P20020 1258 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 USP5P45974 858 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 KIF23Q02241 960 aaPredicted RBP5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 DIXDC1Q155Q3 683 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 NTRK3Q16288 839 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 GRIK5Q16478 980 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 ZNF654Q8IZM8 581 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 CLSTN2Q9H4D0 955 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 MCM9Q9NXL9 1143 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 KCNJ14Q9UNX9 436 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 LEMD3Q9Y2U8 911 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 XDHP47989 1333 aa5.65□□□□□ -1.51
TM4SF1-202ENST00000472441 A0A087WWV3 80 aa5.64□□□□□ -1.51
TM4SF1-202ENST00000472441 RIMBP2O15034 1052 aa5.64□□□□□ -1.51
TM4SF1-202ENST00000472441 SPTLC2O15270 562 aa5.64□□□□□ -1.51
TM4SF1-202ENST00000472441 NMT2O60551 498 aa5.64□□□□□ -1.51
TM4SF1-202ENST00000472441 KINO60870 393 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms