RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 USP21Q9UK80 565 aa18.95■□□□□ 0.62
HOXB3-205ENST00000470495 GABPB1Q06547 395 aaPredicted RBP18.95■□□□□ 0.62
HOXB3-205ENST00000470495 RTN1Q16799 776 aa18.95■□□□□ 0.62
HOXB3-205ENST00000470495 ERCC4Q92889 916 aaPredicted RBP18.95■□□□□ 0.62
HOXB3-205ENST00000470495 CNNM2Q9H8M5 875 aa18.95■□□□□ 0.62
HOXB3-205ENST00000470495 RIPOR2Q9Y4F9 1068 aa18.95■□□□□ 0.62
HOXB3-205ENST00000470495 CCDC196A0A1B0GTZ2 297 aa18.95■□□□□ 0.62
HOXB3-205ENST00000470495 ERFEQ4G0M1 354 aa18.95■□□□□ 0.62
HOXB3-205ENST00000470495 ZNF274Q96GC6 653 aaPredicted RBP18.94■□□□□ 0.62
HOXB3-205ENST00000470495 USP28Q96RU2 1077 aa18.94■□□□□ 0.62
HOXB3-205ENST00000470495 HOOK1Q9UJC3 728 aaKnown RBP18.94■□□□□ 0.62
HOXB3-205ENST00000470495 FAM208AQ9UK61 1670 aaKnown RBP18.94■□□□□ 0.62
HOXB3-205ENST00000470495 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
HOXB3-205ENST00000470495 SDR42E1Q8WUS8 393 aa18.94■□□□□ 0.62
HOXB3-205ENST00000470495 NR1I2O75469 434 aa18.94■□□□□ 0.62
HOXB3-205ENST00000470495 OLFM4Q6UX06 510 aa18.94■□□□□ 0.62
HOXB3-205ENST00000470495 MARCH10Q8NA82 808 aaPredicted RBP18.94■□□□□ 0.62
HOXB3-205ENST00000470495 PRIMPOLQ96LW4 560 aa18.94■□□□□ 0.62
HOXB3-205ENST00000470495 PRKAB2O43741 272 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 IFNL3Q8IZI9 196 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 MRPS27Q92552 414 aaKnown RBP18.93■□□□□ 0.62
HOXB3-205ENST00000470495 SPTLC2O15270 562 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 ESR2Q92731 530 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 NYXQ9GZU5 481 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 INCENPQ9NQS7 918 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 TPM1P09493 284 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 NUCKS1Q9H1E3 243 aaKnown RBP18.93■□□□□ 0.62
HOXB3-205ENST00000470495 MKNK2Q9HBH9 465 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 ANO10Q9NW15 660 aa18.93■□□□□ 0.62
HOXB3-205ENST00000470495 SETSIPP0DME0 302 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 CATIPQ7Z7H3 387 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 SRP68Q9UHB9 627 aaKnown RBP18.92■□□□□ 0.62
HOXB3-205ENST00000470495 CSF1RP07333 972 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 TPD52L1Q16890 204 aaPredicted RBP18.92■□□□□ 0.62
HOXB3-205ENST00000470495 ARGLU1Q9NWB6 273 aaPredicted RBP18.92■□□□□ 0.62
HOXB3-205ENST00000470495 CDHR2Q9BYE9 1310 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 GNAT2P19087 354 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 UBE3CQ15386 1083 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 CMTR1Q8N1G2 835 aaKnown RBP18.92■□□□□ 0.62
HOXB3-205ENST00000470495 FEZ1Q99689 392 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 TSPY2A6NKD2 308 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 C6orf229H3BNL8 230 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 PDILTQ8N807 584 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 GJB4Q9NTQ9 266 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 ZKSCAN5Q9Y2L8 839 aa18.92■□□□□ 0.62
HOXB3-205ENST00000470495 CTAGE5O15320 804 aa18.91■□□□□ 0.62
HOXB3-205ENST00000470495 GRIPAP1Q4V328 841 aa18.91■□□□□ 0.62
HOXB3-205ENST00000470495 CTCFLQ8NI51 663 aaPredicted RBP18.91■□□□□ 0.62
HOXB3-205ENST00000470495 DYDC1Q8WWB3 177 aa18.91■□□□□ 0.62
HOXB3-205ENST00000470495 KCNG4Q8TDN1 519 aa18.91■□□□□ 0.62
HOXB3-205ENST00000470495 PPP1R9BQ96SB3 815 aa18.91■□□□□ 0.62
HOXB3-205ENST00000470495 STX1AQ16623 288 aa18.9■□□□□ 0.62
HOXB3-205ENST00000470495 IFIT1BQ5T764 474 aaKnown RBP18.9■□□□□ 0.62
HOXB3-205ENST00000470495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.9■□□□□ 0.62
HOXB3-205ENST00000470495 SLC4A9Q96Q91 983 aa18.9■□□□□ 0.62
HOXB3-205ENST00000470495 RPS8P62241 208 aaKnown RBP18.9■□□□□ 0.62
HOXB3-205ENST00000470495 TSGA10IPQ3SY00 556 aa18.9■□□□□ 0.62
HOXB3-205ENST00000470495 CRNKL1Q9BZJ0 848 aaKnown RBP18.9■□□□□ 0.62
HOXB3-205ENST00000470495 SLC24A3Q9HC58 644 aa18.9■□□□□ 0.62
HOXB3-205ENST00000470495 TRAPPC3LQ5T215 181 aa18.9■□□□□ 0.62
HOXB3-205ENST00000470495 TMEM87BQ96K49 555 aa18.9■□□□□ 0.62
HOXB3-205ENST00000470495 JRKLQ9Y4A0 524 aa18.9■□□□□ 0.62
HOXB3-205ENST00000470495 CHRM1P11229 460 aaPredicted RBP18.89■□□□□ 0.62
HOXB3-205ENST00000470495 EIF5P55010 431 aaKnown RBP18.89■□□□□ 0.62
HOXB3-205ENST00000470495 ITPK1Q13572 414 aa18.89■□□□□ 0.62
HOXB3-205ENST00000470495 AATFQ9NY61 560 aaKnown RBP eCLIP18.89■□□□□ 0.62
HOXB3-205ENST00000470495 CLIP2Q9UDT6 1046 aa18.89■□□□□ 0.62
HOXB3-205ENST00000470495 HIBADHP31937 336 aaKnown RBP18.89■□□□□ 0.61
HOXB3-205ENST00000470495 AKNAD1Q5T1N1 836 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 PLA2G12BQ9BX93 195 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 GOPCQ9HD26 462 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 UBN2Q6ZU65 1347 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 ATP2B2Q01814 1243 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 KRBA2Q6ZNG9 492 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 CLSTN2Q9H4D0 955 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
HOXB3-205ENST00000470495 hCG_1642624A0A1W2PR95 340 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 BIN2Q9UBW5 565 aaPredicted RBP18.89■□□□□ 0.61
HOXB3-205ENST00000470495 DENND2AQ9ULE3 1009 aa18.89■□□□□ 0.61
HOXB3-205ENST00000470495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
HOXB3-205ENST00000470495 SUFUQ9UMX1 484 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 SPATA31A1Q5TZJ5 1347 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 SERPINC1P01008 464 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 LCORLQ8N3X6 602 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 RNF217Q8TC41 542 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 MARCH6O60337 910 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 LMAN1P49257 510 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 MCM9Q9NXL9 1143 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
HOXB3-205ENST00000470495 SYKP43405 635 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 KRT40Q6A162 431 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 CNNM3Q8NE01 707 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 KCNB2Q92953 911 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 AIFM3Q96NN9 605 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 SRRTQ9BXP5 876 aaKnown RBP18.87■□□□□ 0.61
HOXB3-205ENST00000470495 NF2P35240 595 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 RESTQ13127 1097 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 EGFL6Q8IUX8 553 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 ZNF34Q8IZ26 560 aa18.87■□□□□ 0.61
HOXB3-205ENST00000470495 RFX7Q2KHR2 1363 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms