RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 CCNT1O60563 726 aaKnown RBP17.72■□□□□ 0.43
BRAT1-204ENST00000469750 TUBB4BP68371 445 aa17.72■□□□□ 0.43
BRAT1-204ENST00000469750 PLCB3Q01970 1234 aa17.72■□□□□ 0.43
BRAT1-204ENST00000469750 RAPGEF1Q13905 1077 aa17.72■□□□□ 0.43
BRAT1-204ENST00000469750 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
BRAT1-204ENST00000469750 CCDC50Q8IVM0 306 aa17.72■□□□□ 0.43
BRAT1-204ENST00000469750 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 TTC38Q5R3I4 469 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 LARGE2Q8N3Y3 721 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 CUTAO60888 179 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 ATP5JP18859 108 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 ZNF569Q5MCW4 686 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 SUPT20HQ8NEM7 779 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 SREK1Q8WXA9 508 aaKnown RBP17.71■□□□□ 0.43
BRAT1-204ENST00000469750 CTNND2Q9UQB3 1225 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 MCM6Q14566 821 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 KRT222Q8N1A0 295 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 NOC4LQ9BVI4 516 aaKnown RBP17.71■□□□□ 0.43
BRAT1-204ENST00000469750 NDUFB9Q9Y6M9 179 aa17.71■□□□□ 0.43
BRAT1-204ENST00000469750 FERP16591 822 aa17.71■□□□□ 0.42
BRAT1-204ENST00000469750 MAP3K9P80192 1104 aa17.71■□□□□ 0.42
BRAT1-204ENST00000469750 TBC1D22AQ8WUA7 517 aa17.71■□□□□ 0.42
BRAT1-204ENST00000469750 NEO1Q92859 1461 aa17.71■□□□□ 0.42
BRAT1-204ENST00000469750 AKR1B15C9JRZ8 316 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-204ENST00000469750 SSX2IPQ9Y2D8 614 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 ATP6V0A2Q9Y487 856 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 CHMP2AO43633 222 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 OPA1O60313 960 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 SLC1A4P43007 532 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 GIGYF1O75420 1035 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-204ENST00000469750 NONOQ15233 471 aaKnown RBP eCLIP17.7■□□□□ 0.42
BRAT1-204ENST00000469750 KRT25Q7Z3Z0 450 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 CAPZA3Q96KX2 299 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 TXKP42681 527 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 SMTNP53814 917 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 APBB1IPQ7Z5R6 666 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-204ENST00000469750 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
BRAT1-204ENST00000469750 TBC1D8BQ0IIM8 1120 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 PSMD1Q99460 953 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 ADCY7P51828 1080 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 FNBP1Q96RU3 617 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 STMN4Q9H169 189 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-204ENST00000469750 CEP170Q5SW79 1584 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-204ENST00000469750 PHKG2P15735 406 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 OTUD7BQ6GQQ9 843 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 BAG1Q99933 345 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-204ENST00000469750 USP21Q9UK80 565 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 HOOK2Q96ED9 719 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
BRAT1-204ENST00000469750 BIRC3Q13489 604 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 MAPKAPK5Q8IW41 473 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 TSGA10Q9BZW7 698 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 CLSTN2Q9H4D0 955 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 STK24Q9Y6E0 443 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 CTSWP56202 376 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
BRAT1-204ENST00000469750 LTKP29376 864 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 HSPA4P34932 840 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 PDE6BP35913 854 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.68■□□□□ 0.42
BRAT1-204ENST00000469750 POLR2DO15514 142 aaKnown RBP17.68■□□□□ 0.42
BRAT1-204ENST00000469750 DKC1O60832 514 aaKnown RBP eCLIP17.68■□□□□ 0.42
BRAT1-204ENST00000469750 ECM2O94769 699 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-204ENST00000469750 TRIM14Q14142 442 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 ZYXQ15942 572 aaKnown RBP17.68■□□□□ 0.42
BRAT1-204ENST00000469750 KRT40Q6A162 431 aa17.68■□□□□ 0.42
BRAT1-204ENST00000469750 NSRP1Q9H0G5 558 aaKnown RBP17.68■□□□□ 0.42
BRAT1-204ENST00000469750 VWA3BQ502W6 1294 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 WDR44Q5JSH3 913 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 FAM173BQ6P4H8 233 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 IL17REQ8NFR9 667 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 ZFYVE16Q7Z3T8 1539 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 ABCC4O15439 1325 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
BRAT1-204ENST00000469750 CCDC122Q5T0U0 273 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 C6orf163Q5TEZ5 329 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 SYT10Q6XYQ8 523 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 KDRP35968 1356 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 PHKBQ93100 1093 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 CCDC169A6NNP5 214 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 IGSF22Q8N9C0 903 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 LRWD1Q9UFC0 647 aa17.67■□□□□ 0.42
BRAT1-204ENST00000469750 TNNC1P63316 161 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 TGFBRAP1Q8WUH2 860 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 PPP1R9BQ96SB3 815 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 TM6SF1Q9BZW5 370 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 E7EWF7 191 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.66■□□□□ 0.42
BRAT1-204ENST00000469750 SSH3Q8TE77 659 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 LEO1Q8WVC0 666 aaPredicted RBP17.66■□□□□ 0.42
BRAT1-204ENST00000469750 VPS16Q9H269 839 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 HARSP12081 509 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms