RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PDIA3P30101 505 aaKnown RBP14.18□□□□□ -0.14
USP11-206ENST00000469080 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
USP11-206ENST00000469080 PUM3Q15397 648 aaKnown RBP14.18□□□□□ -0.14
USP11-206ENST00000469080 FAM47AQ5JRC9 791 aa14.18□□□□□ -0.14
USP11-206ENST00000469080 C3orf67Q6ZVT6 689 aa14.18□□□□□ -0.14
USP11-206ENST00000469080 ZNF652Q9Y2D9 606 aa14.18□□□□□ -0.14
USP11-206ENST00000469080 TPD52L1Q16890 204 aaPredicted RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 HELLSQ9NRZ9 838 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 MAP2K2P36507 400 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 VAT1LQ9HCJ6 419 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 PES1O00541 588 aaKnown RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 RPAINQ86UA6 219 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 LCORLQ8N3X6 602 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 MNS1Q8NEH6 495 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 ANKRD20A12PQ8NF67 263 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 AK7Q96M32 723 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 NLRP3Q96P20 1036 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 SCAND2PQ9GZW5 306 aaPredicted RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 SAP30BPQ9UHR5 308 aaKnown RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 KLRK1P26718 216 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 ZSCAN25Q6NSZ9 544 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 TM6SF1Q9BZW5 370 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 ZBTB43O43298 467 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 IARSP41252 1262 aaKnown RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 ZNF165P49910 485 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 SYCP1Q15431 976 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 MSL1Q68DK7 614 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 UTYO14607 1347 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 SMC2O95347 1197 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 CLEC17AQ6ZS10 378 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 TBC1D10CQ8IV04 446 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 LPIN2Q92539 896 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 CDC5LQ99459 802 aaKnown RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 PPP1R1BQ9UD71 204 aaPredicted RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 ZNF215Q9UL58 517 aaPredicted RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 TBC1D9BQ66K14 1250 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 DZIP1Q86YF9 867 aaKnown RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 NSUN7Q8NE18 718 aaKnown RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 CFAP45Q9UL16 551 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 RIPOR2Q9Y4F9 1068 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 TYRO3Q06418 890 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 NAA16Q6N069 864 aaPredicted RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 PACS2Q86VP3 889 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 IL6STP40189 918 aaPredicted RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 NKX2-3Q8TAU0 364 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 RTCBQ9Y3I0 505 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 DCCP43146 1447 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 HMGB1P09429 215 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 USP5P45974 858 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 STAMQ92783 540 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 KCNF1Q9H3M0 494 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 STX8Q9UNK0 236 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 CLIC4Q9Y696 253 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 MPHOSPH10O00566 681 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 TPM4P67936 248 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 ST5P78524 1137 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 KLHL10Q6JEL2 608 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 FAM196AQ6ZSG2 479 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 CLIC6Q96NY7 704 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 TRMT1Q9NXH9 659 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 KIF1CO43896 1103 aaKnown RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 EVX2Q03828 476 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 SRLQ86TD4 932 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 FAM177A1Q8N128 213 aaPredicted RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 PTGS1P23219 599 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 EIF6P56537 245 aaKnown RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 HOMER1Q86YM7 354 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 IFNL3Q8IZI9 196 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 PICALMQ13492 652 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 WTAPQ15007 396 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 SAFBQ15424 915 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP11-206ENST00000469080 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 ANKRD65E5RJM6 399 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 TRIM37O94972 964 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 ZFYP08048 801 aaPredicted RBP14.12□□□□□ -0.15
USP11-206ENST00000469080 MUM1L1Q5H9M0 696 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 PGBD1Q96JS3 809 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 XIRP1Q702N8 1843 aaKnown RBP14.12□□□□□ -0.15
USP11-206ENST00000469080 MAGEB6P1A0A0J9YX57 407 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 NMT2O60551 498 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 COBLO75128 1261 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 LMAN1P49257 510 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 TTF1Q15361 905 aaPredicted RBP14.12□□□□□ -0.15
USP11-206ENST00000469080 DIXDC1Q155Q3 683 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 LINC00116Q8NCU8 138 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 DSCC1Q9BVC3 393 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 PAXBP1Q9Y5B6 917 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms