RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PDIA3P30101 505 aaKnown RBP14.18□□□□□ -0.14
USP11-206ENST00000469080 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
USP11-206ENST00000469080 PUM3Q15397 648 aaKnown RBP14.18□□□□□ -0.14
USP11-206ENST00000469080 FAM47AQ5JRC9 791 aa14.18□□□□□ -0.14
USP11-206ENST00000469080 C3orf67Q6ZVT6 689 aa14.18□□□□□ -0.14
USP11-206ENST00000469080 ZNF652Q9Y2D9 606 aa14.18□□□□□ -0.14
USP11-206ENST00000469080 TPD52L1Q16890 204 aaPredicted RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 HELLSQ9NRZ9 838 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 MAP2K2P36507 400 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 VAT1LQ9HCJ6 419 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 PES1O00541 588 aaKnown RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 RPAINQ86UA6 219 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 LCORLQ8N3X6 602 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 MNS1Q8NEH6 495 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 ANKRD20A12PQ8NF67 263 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 AK7Q96M32 723 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 NLRP3Q96P20 1036 aa14.17□□□□□ -0.14
USP11-206ENST00000469080 SCAND2PQ9GZW5 306 aaPredicted RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 SAP30BPQ9UHR5 308 aaKnown RBP14.17□□□□□ -0.14
USP11-206ENST00000469080 KLRK1P26718 216 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 ZSCAN25Q6NSZ9 544 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 TM6SF1Q9BZW5 370 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 ZBTB43O43298 467 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 IARSP41252 1262 aaKnown RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 ZNF165P49910 485 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 SYCP1Q15431 976 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 MSL1Q68DK7 614 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 UTYO14607 1347 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 SMC2O95347 1197 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 CLEC17AQ6ZS10 378 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 TBC1D10CQ8IV04 446 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 LPIN2Q92539 896 aa14.16□□□□□ -0.14
USP11-206ENST00000469080 CDC5LQ99459 802 aaKnown RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 PPP1R1BQ9UD71 204 aaPredicted RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 ZNF215Q9UL58 517 aaPredicted RBP14.16□□□□□ -0.14
USP11-206ENST00000469080 TBC1D9BQ66K14 1250 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 DZIP1Q86YF9 867 aaKnown RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 NSUN7Q8NE18 718 aaKnown RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 CFAP45Q9UL16 551 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 RIPOR2Q9Y4F9 1068 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 TYRO3Q06418 890 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 NAA16Q6N069 864 aaPredicted RBP14.15□□□□□ -0.14
USP11-206ENST00000469080 PACS2Q86VP3 889 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
USP11-206ENST00000469080 IL6STP40189 918 aaPredicted RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 NKX2-3Q8TAU0 364 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 RTCBQ9Y3I0 505 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 DCCP43146 1447 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 HMGB1P09429 215 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 USP5P45974 858 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 STAMQ92783 540 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 KCNF1Q9H3M0 494 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 STX8Q9UNK0 236 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 CLIC4Q9Y696 253 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 MPHOSPH10O00566 681 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 TPM4P67936 248 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 ST5P78524 1137 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 KLHL10Q6JEL2 608 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 FAM196AQ6ZSG2 479 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 CLIC6Q96NY7 704 aa14.14□□□□□ -0.15
USP11-206ENST00000469080 TRMT1Q9NXH9 659 aaKnown RBP14.14□□□□□ -0.15
USP11-206ENST00000469080 KIF1CO43896 1103 aaKnown RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 EVX2Q03828 476 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 SRLQ86TD4 932 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 FAM177A1Q8N128 213 aaPredicted RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 PTGS1P23219 599 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 EIF6P56537 245 aaKnown RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 HOMER1Q86YM7 354 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 IFNL3Q8IZI9 196 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
USP11-206ENST00000469080 PICALMQ13492 652 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 WTAPQ15007 396 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 SAFBQ15424 915 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP11-206ENST00000469080 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
USP11-206ENST00000469080 ANKRD65E5RJM6 399 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 TRIM37O94972 964 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 ZFYP08048 801 aaPredicted RBP14.12□□□□□ -0.15
USP11-206ENST00000469080 MUM1L1Q5H9M0 696 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 PGBD1Q96JS3 809 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 XIRP1Q702N8 1843 aaKnown RBP14.12□□□□□ -0.15
USP11-206ENST00000469080 MAGEB6P1A0A0J9YX57 407 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 NMT2O60551 498 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 COBLO75128 1261 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 LMAN1P49257 510 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 TTF1Q15361 905 aaPredicted RBP14.12□□□□□ -0.15
USP11-206ENST00000469080 DIXDC1Q155Q3 683 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 LINC00116Q8NCU8 138 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 DSCC1Q9BVC3 393 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 PAXBP1Q9Y5B6 917 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
USP11-206ENST00000469080 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms