RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ELMSAN1Q6PJG2 1045 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 RUFY4Q6ZNE9 571 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 C16orf86Q6ZW13 317 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 LSRQ86X29 649 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 TRIM22Q8IYM9 498 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 ZC3H12CQ9C0D7 883 aaKnown RBP5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 KLHL42Q9P2K6 505 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 ATXN7L1Q9ULK2 861 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 ZNRF3Q9ULT6 936 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 LEMD3Q9Y2U8 911 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 CNGA1P29973 690 aa5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 RPL6Q02878 288 aaKnown RBP5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 IKBKEQ14164 716 aa5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 SYT9Q86SS6 491 aa5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 STK35Q8TDR2 534 aa5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 THAP3Q8WTV1 239 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 TMX1Q9H3N1 280 aa5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 SH2B1Q9NRF2 756 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 MSRB2Q9Y3D2 182 aa5.15□□□□□ -1.59
HMGB1P25-201ENST00000468402 B2RBV5 119 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 PIK3R2O00459 728 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 ASMTLO95671 621 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 B3GALT4O96024 378 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 PCBP4P57723 403 aaKnown RBP5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 CTBSQ01459 385 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 GSTM4Q03013 218 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 TCEA2Q15560 299 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 C21orf62-AS1Q17RA5 79 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 LRRFIP1Q32MZ4 808 aaKnown RBP5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 GDF6Q6KF10 455 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 C6orf15Q6UXA7 325 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 TTC6Q86TZ1 520 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 FAM178BQ8IXR5 827 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 SLC7A3Q8WY07 619 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 FEZ1Q99689 392 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 SMG9Q9H0W8 520 aaKnown RBP5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 ANTXR1Q9H6X2 564 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 NDFIP2Q9NV92 336 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 PCDHA4Q9UN74 947 aa5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 G3BP2Q9UN86 482 aaKnown RBP5.14□□□□□ -1.59
HMGB1P25-201ENST00000468402 FAM86C2PA6NEL3 165 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 DIAPH1O60610 1272 aaKnown RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 PROCP04070 461 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 S100BP04271 92 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 BMP4P12644 408 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 HCLS1P14317 486 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 CDC27P30260 824 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 CASP7P55210 303 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 PTPN11Q06124 597 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 SQSTM1Q13501 440 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 UBAP2LQ14157 1087 aaKnown RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 GAS6Q14393 721 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 C2orf27AQ580R0 203 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 MPRIPQ6WCQ1 1025 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 SPATC1Q76KD6 591 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 VN1R5Q7Z5H4 357 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 RBBP8NLQ8NC74 664 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 ZNF837Q96EG3 531 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 EHMT1Q9H9B1 1298 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 TMEM260Q9NX78 707 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 HCN2Q9UL51 889 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 TRIM33Q9UPN9 1127 aa5.13□□□□□ -1.59
HMGB1P25-201ENST00000468402 A0A1W2PQH9 124 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 GSTP1P09211 210 aaKnown RBP5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 ESRRAP11474 423 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 GUCY2CP25092 1073 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 MASP1P48740 699 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 ARL4DP49703 201 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 AP3B2Q13367 1082 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 TKFCQ3LXA3 575 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 WIPI1Q5MNZ9 446 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 PERM1Q5SV97 790 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 ZMYM1Q5SVZ6 1142 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 FAM182BQ5T319 152 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 EEPD1Q7L9B9 569 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 KIAA0907Q7Z7F0 614 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 NBPF11Q86T75 865 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 PRPF38AQ8NAV1 312 aaKnown RBP5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 GMCL1Q96IK5 515 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 CEP89Q96ST8 783 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 TM9SF2Q99805 663 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 CORO1BQ9BR76 489 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 DDX56Q9NY93 547 aaKnown RBP5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 SLC6A14Q9UN76 642 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 SOX13Q9UN79 622 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 POLR3KQ9Y2Y1 108 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 PTCH2Q9Y6C5 1203 aa5.12□□□□□ -1.59
HMGB1P25-201ENST00000468402 HTR3BO95264 441 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 PLCG1P19174 1290 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 MAP2K3P46734 347 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 HNRNPUQ00839 825 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 AMPD3Q01432 767 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 CT47A1Q5JQC4 288 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 FAM117BQ6P1L5 589 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 VHLLQ6RSH7 139 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 HDXQ7Z353 690 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 C19orf47Q8N9M1 422 aaKnown RBP5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 GAL3ST3Q96A11 431 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 ACDQ96AP0 544 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms