RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GPATCH3Q96I76 525 aa15.69■□□□□ 0.1
COL5A1-206ENST00000465877 CSRNP1Q96S65 589 aa15.69■□□□□ 0.1
COL5A1-206ENST00000465877 PAG1Q9NWQ8 432 aa15.69■□□□□ 0.1
COL5A1-206ENST00000465877 BAG3O95817 575 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 CYP7A1P22680 504 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 MKRN3Q13064 507 aaKnown RBP15.68■□□□□ 0.1
COL5A1-206ENST00000465877 VGLL4Q14135 290 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 SH3RF3Q8TEJ3 882 aaPredicted RBP15.68■□□□□ 0.1
COL5A1-206ENST00000465877 EDC3Q96F86 508 aaKnown RBP15.68■□□□□ 0.1
COL5A1-206ENST00000465877 WNK4Q96J92 1243 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 WRNIP1Q96S55 665 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 HAUS7Q99871 368 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 BEGAINQ9BUH8 593 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 BOLA2Q9H3K6 86 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 ECHDC1Q9NTX5 307 aa15.68■□□□□ 0.1
COL5A1-206ENST00000465877 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.68■□□□□ 0.1
COL5A1-206ENST00000465877 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
COL5A1-206ENST00000465877 ZBTB48P10074 688 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-206ENST00000465877 PLCG2P16885 1265 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 TSHZ3Q63HK5 1081 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 TMED8Q6PL24 325 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-206ENST00000465877 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-206ENST00000465877 SH3BP5LQ7L8J4 393 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 ZSCAN29Q8IWY8 852 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-206ENST00000465877 GCC1Q96CN9 775 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 ZNF341Q9BYN7 854 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 OSBPL5Q9H0X9 879 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-206ENST00000465877 ELP3Q9H9T3 547 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 CSADQ9Y600 493 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 FLT1P17948 1338 aa15.67■□□□□ 0.1
COL5A1-206ENST00000465877 DDTLA6NHG4 134 aaPredicted RBP15.66■□□□□ 0.1
COL5A1-206ENST00000465877 HSPA8P11142 646 aaKnown RBP15.66■□□□□ 0.1
COL5A1-206ENST00000465877 PDE6AP16499 860 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 CTCFP49711 727 aaPredicted RBP15.66■□□□□ 0.1
COL5A1-206ENST00000465877 PPP4CP60510 307 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 DYNLL1P63167 89 aaKnown RBP15.66■□□□□ 0.1
COL5A1-206ENST00000465877 IRX6P78412 446 aaPredicted RBP15.66■□□□□ 0.1
COL5A1-206ENST00000465877 SPRYD7Q5W111 196 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 MIGA2Q7L4E1 593 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 MIGA1Q8NAN2 632 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 LOC285556D6RIA3 1793 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 TTC41PQ6P2S7 1318 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 CASP8AP2Q9UKL3 1982 aa15.66■□□□□ 0.1
COL5A1-206ENST00000465877 CA12O43570 354 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 MAP3K9P80192 1104 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 CERS3Q8IU89 383 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 OTUD7AQ8TE49 926 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-206ENST00000465877 OPTNQ96CV9 577 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 SNCAIPQ9Y6H5 919 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 SALL3Q9BXA9 1300 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 ZNF532Q9HCE3 1301 aa15.65■□□□□ 0.1
COL5A1-206ENST00000465877 TCRBV5S4A2TA0A5A2 114 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 GJA5P36382 358 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 SREBF2Q12772 1141 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 SLC9C2Q5TAH2 1124 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 MAPKAPK5Q8IW41 473 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-206ENST00000465877 TGFBRAP1Q8WUH2 860 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL5A1-206ENST00000465877 SAGE1Q9NXZ1 904 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-206ENST00000465877 TSKSQ9UJT2 592 aa15.64■□□□□ 0.09
COL5A1-206ENST00000465877 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
COL5A1-206ENST00000465877 MX1P20591 662 aa15.63■□□□□ 0.09
COL5A1-206ENST00000465877 INPP5BP32019 993 aa15.63■□□□□ 0.09
COL5A1-206ENST00000465877 ANKRD45Q5TZF3 282 aa15.63■□□□□ 0.09
COL5A1-206ENST00000465877 SMC5Q8IY18 1101 aa15.63■□□□□ 0.09
COL5A1-206ENST00000465877 PI4K2BQ8TCG2 481 aa15.63■□□□□ 0.09
COL5A1-206ENST00000465877 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
COL5A1-206ENST00000465877 ZKSCAN4Q969J2 545 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-206ENST00000465877 RIOK1Q9BRS2 568 aaKnown RBP15.63■□□□□ 0.09
COL5A1-206ENST00000465877 MANSC4A6NHS7 340 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-206ENST00000465877 SLURP2P0DP57 97 aa15.62■□□□□ 0.09
COL5A1-206ENST00000465877 ADD2P35612 726 aa15.62■□□□□ 0.09
COL5A1-206ENST00000465877 LBX1P52954 281 aa15.62■□□□□ 0.09
COL5A1-206ENST00000465877 NOL9Q5SY16 702 aaKnown RBP15.62■□□□□ 0.09
COL5A1-206ENST00000465877 OTUD5Q96G74 571 aa15.62■□□□□ 0.09
COL5A1-206ENST00000465877 RWDD1Q9H446 243 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-206ENST00000465877 ZNF112Q9UJU3 913 aa15.62■□□□□ 0.09
COL5A1-206ENST00000465877 MAGEB6P1A0A0J9YX57 407 aa15.61■□□□□ 0.09
COL5A1-206ENST00000465877 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
COL5A1-206ENST00000465877 ERC2O15083 957 aa15.61■□□□□ 0.09
COL5A1-206ENST00000465877 DHX36Q9H2U1 1008 aaKnown RBP15.61■□□□□ 0.09
COL5A1-206ENST00000465877 PHF20L1A8MW92 1017 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 GLRX3O76003 335 aaKnown RBP15.6■□□□□ 0.09
COL5A1-206ENST00000465877 IGHDP01880 384 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 CHGBP05060 677 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 USP5P45974 858 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 TM4SF4P48230 202 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 MAP3K10Q02779 954 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 PPIL2Q13356 520 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 SLFNL1Q499Z3 407 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 ERO1BQ86YB8 467 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 LCORLQ8N3X6 602 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 KBTBD3Q8NAB2 608 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 LNPKQ9C0E8 428 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 PRDM10Q9NQV6 1147 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 RNF186Q9NXI6 227 aa15.6■□□□□ 0.09
COL5A1-206ENST00000465877 TBC1D12O60347 775 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms