RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-224ENST00000464148 SMCR8Q8TEV9 937 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-224ENST00000464148 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
MRPL55-224ENST00000464148 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
MRPL55-224ENST00000464148 CAPN2P17655 700 aa16.6■□□□□ 0.25
MRPL55-224ENST00000464148 PTPRAP18433 802 aa16.6■□□□□ 0.25
MRPL55-224ENST00000464148 PXYLP1Q8TE99 480 aa16.6■□□□□ 0.25
MRPL55-224ENST00000464148 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
MRPL55-224ENST00000464148 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 RGS3P49796 1198 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
MRPL55-224ENST00000464148 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 STAP2Q9UGK3 403 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 SLC45A1Q9Y2W3 748 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 AFG3L2Q9Y4W6 797 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 PTPRCP08575 1304 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 COL6A3P12111 3177 aa16.59■□□□□ 0.25
MRPL55-224ENST00000464148 ENTPD3O75355 529 aa16.58■□□□□ 0.24
MRPL55-224ENST00000464148 IRF5Q13568 498 aa16.58■□□□□ 0.24
MRPL55-224ENST00000464148 ATP2B3Q16720 1220 aa16.58■□□□□ 0.24
MRPL55-224ENST00000464148 COA7Q96BR5 231 aa16.58■□□□□ 0.24
MRPL55-224ENST00000464148 SIL1Q9H173 461 aa16.58■□□□□ 0.24
MRPL55-224ENST00000464148 DENND2AQ9ULE3 1009 aa16.58■□□□□ 0.24
MRPL55-224ENST00000464148 ATRNL1Q5VV63 1379 aa16.57■□□□□ 0.24
MRPL55-224ENST00000464148 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
MRPL55-224ENST00000464148 TRIM75PA6NK02 468 aa16.57■□□□□ 0.24
MRPL55-224ENST00000464148 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-224ENST00000464148 RFX5P48382 616 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-224ENST00000464148 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
MRPL55-224ENST00000464148 LRCH3Q96II8 777 aa16.57■□□□□ 0.24
MRPL55-224ENST00000464148 PAWRQ96IZ0 340 aaKnown RBP16.57■□□□□ 0.24
MRPL55-224ENST00000464148 IDI2Q9BXS1 227 aa16.57■□□□□ 0.24
MRPL55-224ENST00000464148 PAK6Q9NQU5 681 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-224ENST00000464148 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
MRPL55-224ENST00000464148 A0A0C4DFX4 3053 aa16.56■□□□□ 0.24
MRPL55-224ENST00000464148 SEMA3EO15041 775 aa16.56■□□□□ 0.24
MRPL55-224ENST00000464148 CTNND1O60716 968 aaKnown RBP16.56■□□□□ 0.24
MRPL55-224ENST00000464148 NECAB2Q7Z6G3 386 aa16.56■□□□□ 0.24
MRPL55-224ENST00000464148 ZGPATQ8N5A5 531 aaKnown RBP16.56■□□□□ 0.24
MRPL55-224ENST00000464148 ANKRD13CQ8N6S4 541 aa16.56■□□□□ 0.24
MRPL55-224ENST00000464148 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 DOCK1Q14185 1865 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 ANP32CO43423 234 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 PHKA1P46020 1223 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 PICALMQ13492 652 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 DZIP1Q86YF9 867 aaKnown RBP16.55■□□□□ 0.24
MRPL55-224ENST00000464148 SLF2Q8IX21 1173 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 FAM9BQ8IZU0 186 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 PNMA3Q9UL41 463 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 AGTPBP1Q9UPW5 1226 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 LAMA3Q16787 3333 aa16.55■□□□□ 0.24
MRPL55-224ENST00000464148 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-224ENST00000464148 SLURP2P0DP57 97 aa16.54■□□□□ 0.24
MRPL55-224ENST00000464148 C7orf61Q8IZ16 206 aa16.54■□□□□ 0.24
MRPL55-224ENST00000464148 CRISPLD2Q9H0B8 497 aa16.54■□□□□ 0.24
MRPL55-224ENST00000464148 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.54■□□□□ 0.24
MRPL55-224ENST00000464148 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-224ENST00000464148 ABCF2Q9UG63 623 aa16.54■□□□□ 0.24
MRPL55-224ENST00000464148 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
MRPL55-224ENST00000464148 PTPRFP10586 1907 aa16.54■□□□□ 0.24
MRPL55-224ENST00000464148 GAKO14976 1311 aa16.53■□□□□ 0.24
MRPL55-224ENST00000464148 CIAO1O76071 339 aa16.53■□□□□ 0.24
MRPL55-224ENST00000464148 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
MRPL55-224ENST00000464148 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
MRPL55-224ENST00000464148 CCDC84Q86UT8 332 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-224ENST00000464148 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
MRPL55-224ENST00000464148 PHIPQ8WWQ0 1821 aa16.53■□□□□ 0.24
MRPL55-224ENST00000464148 FAM110CQ1W6H9 321 aa16.52■□□□□ 0.24
MRPL55-224ENST00000464148 CCDC102BQ68D86 513 aa16.52■□□□□ 0.24
MRPL55-224ENST00000464148 ANKLE1Q8NAG6 615 aa16.52■□□□□ 0.24
MRPL55-224ENST00000464148 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
MRPL55-224ENST00000464148 DDX4Q9NQI0 724 aaKnown RBP16.52■□□□□ 0.24
MRPL55-224ENST00000464148 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
MRPL55-224ENST00000464148 ALPK3Q96L96 1907 aa16.51■□□□□ 0.23
MRPL55-224ENST00000464148 HMGCRP04035 888 aa16.51■□□□□ 0.23
MRPL55-224ENST00000464148 UBTFL1P0CB47 393 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-224ENST00000464148 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-224ENST00000464148 BTDP43251 543 aa16.51■□□□□ 0.23
MRPL55-224ENST00000464148 SPTY2D1Q68D10 685 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-224ENST00000464148 PROCA1Q8NCQ7 364 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-224ENST00000464148 GDF15Q99988 308 aa16.51■□□□□ 0.23
MRPL55-224ENST00000464148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.51■□□□□ 0.23
MRPL55-224ENST00000464148 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-224ENST00000464148 ZMYND8Q9ULU4 1186 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-224ENST00000464148 ADORA1P30542 326 aa16.5■□□□□ 0.23
MRPL55-224ENST00000464148 BMP8BP34820 402 aa16.5■□□□□ 0.23
MRPL55-224ENST00000464148 GCLCP48506 637 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-224ENST00000464148 SPP2Q13103 211 aa16.5■□□□□ 0.23
MRPL55-224ENST00000464148 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.236e-7■■■■□ 25
MRPL55-224ENST00000464148 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-224ENST00000464148 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
MRPL55-224ENST00000464148 MROH7-TTC4A0A0A0MT08 1334 aa16.49■□□□□ 0.23
MRPL55-224ENST00000464148 RPTORQ8N122 1335 aa16.49■□□□□ 0.23
MRPL55-224ENST00000464148 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
MRPL55-224ENST00000464148 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
MRPL55-224ENST00000464148 DEFB123Q8N688 67 aa16.49■□□□□ 0.23
MRPL55-224ENST00000464148 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
MRPL55-224ENST00000464148 TBC1D12O60347 775 aa16.48■□□□□ 0.23
MRPL55-224ENST00000464148 SYN1P17600 705 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms