RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 DONSONQ9NYP3 566 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 RRP15Q9Y3B9 282 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 CLCN6P51797 869 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 AOC3Q16853 763 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 DRC7Q8IY82 874 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 VGLL2Q8N8G2 317 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 SBF1O95248 1867 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 G3V3G9 751 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 CPP00450 1065 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 GIMAP6Q6P9H5 292 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 CEP89Q96ST8 783 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 TACO1Q9BSH4 297 aaKnown RBP13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 AKAP2Q9Y2D5 859 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 ZC3H4Q9UPT8 1303 aaKnown RBP13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 CHD4Q14839 1912 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 NIM1KQ8IY84 436 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 C10orf67Q8IYJ2 551 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 CACTINQ8WUQ7 758 aaKnown RBP13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 EXOC6BQ9Y2D4 811 aa13.29□□□□□ -0.28
TRAPPC3-205ENST00000462715 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 F13A1P00488 732 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 IFIT1P09914 478 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 SLC5A1P13866 664 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 PRELPP51888 382 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 TYRO3Q06418 890 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 TFCP2Q12800 502 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 LRMPQ12912 555 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 LPIN2Q92539 896 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 GPR101Q96P66 508 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 MED4Q9NPJ6 270 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 ST7Q9NRC1 585 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 MRVI1Q9Y6F6 885 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 CCDC88AQ3V6T2 1871 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 ACTN2P35609 894 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 BANK1Q8NDB2 785 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 TRIM5Q9C035 493 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
TRAPPC3-205ENST00000462715 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.28
TRAPPC3-205ENST00000462715 STX6O43752 255 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 GSDMDP57764 484 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 CCAR2Q8N163 923 aaKnown RBP13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 DDX19AQ9NUU7 478 aaKnown RBP13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 SNAP23O00161 211 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 CCP110O43303 1012 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 SASH1O94885 1247 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 NUP62CLQ9H1M0 184 aa13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 MKRN1Q9UHC7 482 aaKnown RBP13.27□□□□□ -0.29
TRAPPC3-205ENST00000462715 WTIPA6NIX2 430 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 FGFR2P21802 821 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 SATB1Q01826 763 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 TRDNQ13061 729 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 CAVIN4Q5BKX8 364 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 CCDC158Q5M9N0 1113 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 NEK11Q8NG66 645 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 COA1Q9GZY4 146 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 CBX8Q9HC52 389 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 GPR108Q9NPR9 543 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 ZNRF3Q9ULT6 936 aa13.26□□□□□ -0.29
TRAPPC3-205ENST00000462715 VPS37DQ86XT2 251 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 ZNF592Q92610 1267 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 SMARCE1Q969G3 411 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 ECE2O60344 883 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 KLRK1P26718 216 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 DBNDD1Q9H9R9 158 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.25□□□□□ -0.291e-7■■■□□ 15.2
TRAPPC3-205ENST00000462715 IRS2Q9Y4H2 1338 aa13.25□□□□□ -0.29
TRAPPC3-205ENST00000462715 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 APBB1O00213 710 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 MCTP2Q6DN12 878 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 RHPN1Q8TCX5 695 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 FAM107BQ9H098 131 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 IMPACTQ9P2X3 320 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 ORC3Q9UBD5 711 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 ZNF609O15014 1411 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 COL4A5P29400 1685 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 FZD9O00144 591 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 TNNI3KQ59H18 835 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms