RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 MANSC4A6NHS7 340 aaPredicted RBP28.18■■■□□ 2.1
LIMK2-206ENST00000462625 SMARCA5O60264 1052 aaPredicted RBP28.18■■■□□ 2.1
LIMK2-206ENST00000462625 CYP7A1P22680 504 aa28.18■■■□□ 2.1
LIMK2-206ENST00000462625 TM4SF4P48230 202 aa28.18■■■□□ 2.1
LIMK2-206ENST00000462625 ZFPM1Q8IX07 1006 aa28.18■■■□□ 2.1
LIMK2-206ENST00000462625 DNAJC2Q99543 621 aaKnown RBP28.18■■■□□ 2.1
LIMK2-206ENST00000462625 RNF186Q9NXI6 227 aa28.18■■■□□ 2.1
LIMK2-206ENST00000462625 AATFQ9NY61 560 aaKnown RBP eCLIP28.18■■■□□ 2.1
LIMK2-206ENST00000462625 RFX7Q2KHR2 1363 aa28.18■■■□□ 2.1
LIMK2-206ENST00000462625 LAMB1P07942 1786 aa28.18■■■□□ 2.1
LIMK2-206ENST00000462625 TRPA1O75762 1119 aa28.17■■■□□ 2.1
LIMK2-206ENST00000462625 ATP5JP18859 108 aa28.17■■■□□ 2.1
LIMK2-206ENST00000462625 PPP4CP60510 307 aa28.17■■■□□ 2.1
LIMK2-206ENST00000462625 VGLL4Q14135 290 aa28.17■■■□□ 2.1
LIMK2-206ENST00000462625 CERS3Q8IU89 383 aa28.17■■■□□ 2.1
LIMK2-206ENST00000462625 ANTXR1Q9H6X2 564 aa28.17■■■□□ 2.1
LIMK2-206ENST00000462625 TSKSQ9UJT2 592 aa28.17■■■□□ 2.1
LIMK2-206ENST00000462625 MAGEB6Q8N7X4 407 aa28.16■■■□□ 2.1
LIMK2-206ENST00000462625 OPTNQ96CV9 577 aa28.16■■■□□ 2.1
LIMK2-206ENST00000462625 GPATCH3Q96I76 525 aa28.16■■■□□ 2.1
LIMK2-206ENST00000462625 DDX4Q9NQI0 724 aaKnown RBP28.16■■■□□ 2.1
LIMK2-206ENST00000462625 CDK5RAP2Q96SN8 1893 aa28.16■■■□□ 2.1
LIMK2-206ENST00000462625 SH3RF3Q8TEJ3 882 aaPredicted RBP28.15■■■□□ 2.1
LIMK2-206ENST00000462625 ZBTB47Q9UFB7 747 aaPredicted RBP28.15■■■□□ 2.1
LIMK2-206ENST00000462625 FOCADQ5VW36 1801 aa28.15■■■□□ 2.1
LIMK2-206ENST00000462625 GOLIM4O00461 696 aa28.14■■■□□ 2.1
LIMK2-206ENST00000462625 BOLA2Q9H3K6 86 aa28.14■■■□□ 2.1
LIMK2-206ENST00000462625 CASP8AP2Q9UKL3 1982 aa28.13■■■□□ 2.09
LIMK2-206ENST00000462625 ADGRA1Q86SQ6 560 aa28.13■■■□□ 2.09
LIMK2-206ENST00000462625 ERO1BQ86YB8 467 aa28.13■■■□□ 2.09
LIMK2-206ENST00000462625 ZKSCAN4Q969J2 545 aaPredicted RBP28.13■■■□□ 2.09
LIMK2-206ENST00000462625 PAG1Q9NWQ8 432 aa28.13■■■□□ 2.09
LIMK2-206ENST00000462625 ZNF112Q9UJU3 913 aa28.13■■■□□ 2.09
LIMK2-206ENST00000462625 SUPT16HQ9Y5B9 1047 aaKnown RBP28.13■■■□□ 2.09
LIMK2-206ENST00000462625 DDTLA6NHG4 134 aaPredicted RBP28.12■■■□□ 2.09
LIMK2-206ENST00000462625 ALDH1A1P00352 501 aa28.12■■■□□ 2.09
LIMK2-206ENST00000462625 OTUD7BQ6GQQ9 843 aa28.12■■■□□ 2.09
LIMK2-206ENST00000462625 HAUS7Q99871 368 aa28.12■■■□□ 2.09
LIMK2-206ENST00000462625 OSBPL5Q9H0X9 879 aaPredicted RBP28.12■■■□□ 2.09
LIMK2-206ENST00000462625 ECHDC1Q9NTX5 307 aa28.12■■■□□ 2.09
LIMK2-206ENST00000462625 COL2A1P02458 1487 aaPredicted RBP28.12■■■□□ 2.09
LIMK2-206ENST00000462625 ATRNL1Q5VV63 1379 aa28.11■■■□□ 2.09
LIMK2-206ENST00000462625 SLC9C2Q5TAH2 1124 aa28.11■■■□□ 2.09
LIMK2-206ENST00000462625 SH3BP5LQ7L8J4 393 aa28.11■■■□□ 2.09
LIMK2-206ENST00000462625 TNS4Q8IZW8 715 aa28.11■■■□□ 2.09
LIMK2-206ENST00000462625 OTUD5Q96G74 571 aa28.11■■■□□ 2.09
LIMK2-206ENST00000462625 SNCAIPQ9Y6H5 919 aa28.11■■■□□ 2.09
LIMK2-206ENST00000462625 MYH7P12883 1935 aa28.11■■■□□ 2.09
LIMK2-206ENST00000462625 SPDYE5A6NIY4 337 aa28.1■■■□□ 2.09
LIMK2-206ENST00000462625 INPP5BP32019 993 aa28.1■■■□□ 2.09
LIMK2-206ENST00000462625 GJA5P36382 358 aa28.1■■■□□ 2.09
LIMK2-206ENST00000462625 TGFBRAP1Q8WUH2 860 aa28.1■■■□□ 2.09
LIMK2-206ENST00000462625 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.1■■■□□ 2.09
LIMK2-206ENST00000462625 DHX36Q9H2U1 1008 aaKnown RBP28.1■■■□□ 2.09
LIMK2-206ENST00000462625 GTF2A2P52657 109 aa28.09■■■□□ 2.09
LIMK2-206ENST00000462625 HDAC1Q13547 482 aaPredicted RBP28.09■■■□□ 2.09
LIMK2-206ENST00000462625 MIGA1Q8NAN2 632 aa28.09■■■□□ 2.09
LIMK2-206ENST00000462625 GCC1Q96CN9 775 aa28.09■■■□□ 2.09
LIMK2-206ENST00000462625 MYH1P12882 1939 aa28.08■■■□□ 2.09
LIMK2-206ENST00000462625 TBC1D12O60347 775 aa28.08■■■□□ 2.09
LIMK2-206ENST00000462625 DYNLL1P63167 89 aaKnown RBP28.08■■■□□ 2.09
LIMK2-206ENST00000462625 MAP3K10Q02779 954 aa28.08■■■□□ 2.09
LIMK2-206ENST00000462625 PPATQ06203 517 aa28.08■■■□□ 2.09
LIMK2-206ENST00000462625 IFNL1Q8IU54 200 aa28.08■■■□□ 2.09
LIMK2-206ENST00000462625 PDE6AP16499 860 aa28.07■■■□□ 2.08
LIMK2-206ENST00000462625 NOL9Q5SY16 702 aaKnown RBP28.07■■■□□ 2.08
LIMK2-206ENST00000462625 MAPKAPK5Q8IW41 473 aa28.07■■■□□ 2.08
LIMK2-206ENST00000462625 CNKSR2Q8WXI2 1034 aa28.07■■■□□ 2.08
LIMK2-206ENST00000462625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.07■■■□□ 2.08
LIMK2-206ENST00000462625 PI4KBQ9UBF8 816 aa28.07■■■□□ 2.08
LIMK2-206ENST00000462625 MAGEB6P1A0A0J9YX57 407 aa28.06■■■□□ 2.08
LIMK2-206ENST00000462625 USP5P45974 858 aa28.06■■■□□ 2.08
LIMK2-206ENST00000462625 PPIL2Q13356 520 aa28.06■■■□□ 2.08
LIMK2-206ENST00000462625 EDC3Q96F86 508 aaKnown RBP28.06■■■□□ 2.08
LIMK2-206ENST00000462625 RWDD1Q9H446 243 aaPredicted RBP28.06■■■□□ 2.08
LIMK2-206ENST00000462625 PICK1Q9NRD5 415 aa28.06■■■□□ 2.08
LIMK2-206ENST00000462625 FLT1P17948 1338 aa28.06■■■□□ 2.08
LIMK2-206ENST00000462625 TESPA1A2RU30 521 aaPredicted RBP28.05■■■□□ 2.08
LIMK2-206ENST00000462625 PHF20L1A8MW92 1017 aa28.05■■■□□ 2.08
LIMK2-206ENST00000462625 ZSCAN25Q6NSZ9 544 aa28.05■■■□□ 2.08
LIMK2-206ENST00000462625 HERC5Q9UII4 1024 aaKnown RBP28.05■■■□□ 2.08
LIMK2-206ENST00000462625 DOCK1Q14185 1865 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 ZNF532Q9HCE3 1301 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 CTNND1O60716 968 aaKnown RBP28.04■■■□□ 2.08
LIMK2-206ENST00000462625 TBC1D8O95759 1140 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 CETPP11597 493 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 SNAPC2Q13487 334 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 ANKRD45Q5TZF3 282 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 SCYL3Q8IZE3 742 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 EXOC6Q8TAG9 804 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 MS4A4AQ96JQ5 239 aa28.04■■■□□ 2.08
LIMK2-206ENST00000462625 TTC41PQ6P2S7 1318 aa28.03■■■□□ 2.08
LIMK2-206ENST00000462625 CCL15-CCL14A0A0B4J2E2 113 aa28.03■■■□□ 2.08
LIMK2-206ENST00000462625 ERC2O15083 957 aa28.03■■■□□ 2.08
LIMK2-206ENST00000462625 CCL15Q16663 113 aa28.03■■■□□ 2.08
LIMK2-206ENST00000462625 CFHR5Q9BXR6 569 aa28.03■■■□□ 2.08
LIMK2-206ENST00000462625 TRIM34Q9BYJ4 488 aa28.03■■■□□ 2.08
LIMK2-206ENST00000462625 IGF2BP3O00425 579 aaKnown RBP eCLIP28.02■■■□□ 2.08
LIMK2-206ENST00000462625 IRF6O14896 467 aa28.02■■■□□ 2.08
LIMK2-206ENST00000462625 HLA-DOAP06340 250 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms