RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ZNF341Q9BYN7 854 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 TMOD2Q9NZR1 351 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 FAM198AQ9UFP1 575 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 ZNF112Q9UJU3 913 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 KCNH4Q9UQ05 1017 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 MAST2Q6P0Q8 1798 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 SLC5A1P13866 664 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 NOL9Q5SY16 702 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 DCAF15Q66K64 600 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 CDC42EP5Q6NZY7 148 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 ATF7IPQ6VMQ6 1270 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 FAM151AQ8WW52 585 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 LPIN2Q92539 896 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 TRIM47Q96LD4 638 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
CDC42BPA-210ENST00000462553 PLXNB2O15031 1838 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 MYCP01106 439 aaPredicted RBP9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 TCP10Q12799 353 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 ARHGEF6Q15052 776 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 ANKRD23Q86SG2 305 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 NBPF11Q86T75 865 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 WDR66Q8TBY9 1149 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 HOOK2Q96ED9 719 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 MEIS3Q99687 375 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 CPA4Q9UI42 421 aa9.87□□□□□ -0.83
CDC42BPA-210ENST00000462553 SALL1Q9NSC2 1324 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 PDHXO00330 501 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 GNRH1P01148 92 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 OSBPP22059 807 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 PHKA1P46020 1223 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 MTFR1Q15390 333 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 SLC4A8Q2Y0W8 1093 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 ZFPM1Q8IX07 1006 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 SIL1Q9H173 461 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 SRRDQ9UH36 339 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 COLQQ9Y215 455 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 CUL9Q8IWT3 2517 aa9.86□□□□□ -0.83
CDC42BPA-210ENST00000462553 GAKO14976 1311 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 PHF20L1A8MW92 1017 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 CIAO1O76071 339 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 ECM2O94769 699 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 BCRP11274 1271 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 RLBP1P12271 317 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 ADORA1P30542 326 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 PSMC4P43686 418 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 PRMT2P55345 433 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 KIF22Q14807 665 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 ATP2B3Q16720 1220 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 GPAT2Q6NUI2 795 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 SH3BP5LQ7L8J4 393 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 UBE2Q1Q7Z7E8 422 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 TMEM57Q8N5G2 664 aa9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-210ENST00000462553 MYPNQ86TC9 1320 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 H0YGN5 161 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 IPO8O15397 1037 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 WDHD1O75717 1129 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 LDHBP07195 334 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 UBTFL1P0CB47 393 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 CYP2C8P10632 490 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 ZKSCAN2Q63HK3 967 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 IDI2Q9BXS1 227 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 USP40Q9NVE5 1235 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 FBXO3Q9UK99 471 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 PA2G4Q9UQ80 394 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 LRRFIP2Q9Y608 721 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 FRMPD3Q5JV73 1810 aa9.84□□□□□ -0.83
CDC42BPA-210ENST00000462553 PDS5AQ29RF7 1337 aaKnown RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 A0A0G2JLL6 359 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 SPDYE4A6NLX3 237 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 SEMA3EO15041 775 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 GALR2O43603 387 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 GRK4P32298 578 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 RGS3P49796 1198 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 MAP3K10Q02779 954 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 PRKCZQ05513 592 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 RASGRF1Q13972 1273 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 PRRT2Q7Z6L0 340 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 SCYL3Q8IZE3 742 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 ZNF384Q8TF68 577 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 PARK7Q99497 189 aaKnown RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 DDX4Q9NQI0 724 aaKnown RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 DENND2AQ9ULE3 1009 aa9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-210ENST00000462553 DDX60LQ5H9U9 1706 aaKnown RBP9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 DDTLA6NHG4 134 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 CXCL11O14625 94 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 ENTPD3O75355 529 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 CCL5P13501 91 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 PTPRAP18433 802 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 IL15P40933 162 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 GJA8P48165 433 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 CCDC102BQ68D86 513 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 PRO3102Q9H379 93 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms