RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.57■□□□□ 0.72
ACTB-207ENST00000462494 KRT23Q9C075 422 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 CNNM2Q9H8M5 875 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 TRMT1Q9NXH9 659 aaKnown RBP19.57■□□□□ 0.72
ACTB-207ENST00000462494 IGHMBP2P38935 993 aaKnown RBP19.57■□□□□ 0.72
ACTB-207ENST00000462494 PTPAQ15257 358 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 CEP135Q66GS9 1140 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 MAP3K14Q99558 947 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 NACAP1Q9BZK3 213 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 CCDC87Q9NVE4 849 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 LRP2BPQ9P2M1 347 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 U2AF2P26368 475 aaKnown RBP eCLIP19.56■□□□□ 0.723e-17■□□□□ 9.4
ACTB-207ENST00000462494 CRKLP46109 303 aaKnown RBP19.56■□□□□ 0.72
ACTB-207ENST00000462494 CCDC152Q4G0S7 254 aa19.56■□□□□ 0.72
ACTB-207ENST00000462494 RGS22Q8NE09 1264 aa19.56■□□□□ 0.72
ACTB-207ENST00000462494 IQSEC3Q9UPP2 1182 aaPredicted RBP19.56■□□□□ 0.72
ACTB-207ENST00000462494 CTIFO43310 598 aaKnown RBP19.56■□□□□ 0.72
ACTB-207ENST00000462494 GSDMDP57764 484 aa19.56■□□□□ 0.72
ACTB-207ENST00000462494 TMC6Q7Z403 805 aa19.56■□□□□ 0.72
ACTB-207ENST00000462494 CCDC94Q9BW85 323 aaPredicted RBP19.56■□□□□ 0.72
ACTB-207ENST00000462494 PAXBP1Q9Y5B6 917 aa19.56■□□□□ 0.72
ACTB-207ENST00000462494 FMNL1O95466 1100 aaPredicted RBP19.55■□□□□ 0.72
ACTB-207ENST00000462494 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
ACTB-207ENST00000462494 GUCY1A2P33402 732 aa19.55■□□□□ 0.72
ACTB-207ENST00000462494 PNOCQ13519 176 aa19.55■□□□□ 0.72
ACTB-207ENST00000462494 CCDC112Q8NEF3 446 aa19.55■□□□□ 0.72
ACTB-207ENST00000462494 TIGD1Q96MW7 591 aa19.55■□□□□ 0.72
ACTB-207ENST00000462494 BCL11BQ9C0K0 894 aaPredicted RBP19.55■□□□□ 0.72
ACTB-207ENST00000462494 NIP7Q9Y221 180 aaKnown RBP eCLIP19.55■□□□□ 0.72
ACTB-207ENST00000462494 WTAPQ15007 396 aa19.55■□□□□ 0.72
ACTB-207ENST00000462494 SART3Q15020 963 aaKnown RBP19.55■□□□□ 0.72
ACTB-207ENST00000462494 PTPN14Q15678 1187 aa19.55■□□□□ 0.72
ACTB-207ENST00000462494 CMTR1Q8N1G2 835 aaKnown RBP19.55■□□□□ 0.72
ACTB-207ENST00000462494 HPSEQ9Y251 543 aa19.55■□□□□ 0.72
ACTB-207ENST00000462494 LRP5O75197 1615 aa19.54■□□□□ 0.72
ACTB-207ENST00000462494 ERICH2A1L162 156 aa19.54■□□□□ 0.72
ACTB-207ENST00000462494 NCAPHQ15003 741 aa19.54■□□□□ 0.72
ACTB-207ENST00000462494 RESP18Q5W5W9 173 aa19.54■□□□□ 0.72
ACTB-207ENST00000462494 PDCL2Q8N4E4 241 aa19.54■□□□□ 0.72
ACTB-207ENST00000462494 KCNJ14Q9UNX9 436 aa19.54■□□□□ 0.72
ACTB-207ENST00000462494 BTBD18B2RXH4 712 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 GNAT2P19087 354 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 CHRNDQ07001 517 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 RTN1Q16799 776 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 SPECC1Q5M775 1068 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 PPP4R3BQ5MIZ7 849 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 STAG1Q8WVM7 1258 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 WASF1Q92558 559 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 OSBPL5Q9H0X9 879 aaPredicted RBP19.53■□□□□ 0.72
ACTB-207ENST00000462494 IMPACTQ9P2X3 320 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
ACTB-207ENST00000462494 STK36Q9NRP7 1315 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 ARAP2Q8WZ64 1704 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 CAMTA2O94983 1202 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 IFNAR1P17181 557 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 SAFBQ15424 915 aaKnown RBP eCLIP19.53■□□□□ 0.72
ACTB-207ENST00000462494 NOSTRINQ8IVI9 506 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 TRIM22Q8IYM9 498 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 NUP133Q8WUM0 1156 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 ABCF2Q9UG63 623 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 ECM29Q5VYK3 1845 aa19.53■□□□□ 0.72
ACTB-207ENST00000462494 CHD4Q14839 1912 aa19.52■□□□□ 0.72
ACTB-207ENST00000462494 CUTAO60888 179 aa19.52■□□□□ 0.72
ACTB-207ENST00000462494 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
ACTB-207ENST00000462494 PARP10Q53GL7 1025 aa19.52■□□□□ 0.72
ACTB-207ENST00000462494 CNNM3Q8NE01 707 aa19.52■□□□□ 0.72
ACTB-207ENST00000462494 MINDY4BA8MYZ0 360 aa19.52■□□□□ 0.71
ACTB-207ENST00000462494 ATP1A3P13637 1013 aa19.52■□□□□ 0.71
ACTB-207ENST00000462494 CYP7A1P22680 504 aa19.52■□□□□ 0.71
ACTB-207ENST00000462494 DIS3L2Q8IYB7 885 aaKnown RBP19.52■□□□□ 0.71
ACTB-207ENST00000462494 CCAR2Q8N163 923 aaKnown RBP19.52■□□□□ 0.71
ACTB-207ENST00000462494 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.52■□□□□ 0.71
ACTB-207ENST00000462494 TUBE1Q9UJT0 475 aa19.52■□□□□ 0.71
ACTB-207ENST00000462494 KCNH3Q9ULD8 1083 aa19.52■□□□□ 0.71
ACTB-207ENST00000462494 DOT1LQ8TEK3 1739 aa19.52■□□□□ 0.71
ACTB-207ENST00000462494 PNPLA7Q6ZV29 1317 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 MMP1P03956 469 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 SIK1P57059 783 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 FANCCQ00597 558 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 DDB1Q16531 1140 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 SDR42E1Q8WUS8 393 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 ANKRD7Q92527 254 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 NTSR2O95665 410 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 NCBP1Q09161 790 aaKnown RBP19.51■□□□□ 0.71
ACTB-207ENST00000462494 ARMCX5Q6P1M9 558 aa19.51■□□□□ 0.71
ACTB-207ENST00000462494 KRI1Q8N9T8 703 aaKnown RBP19.51■□□□□ 0.71
ACTB-207ENST00000462494 DOCK2Q92608 1830 aa19.5■□□□□ 0.71
ACTB-207ENST00000462494 IKBKBO14920 756 aa19.5■□□□□ 0.71
ACTB-207ENST00000462494 SFPQP23246 707 aaKnown RBP eCLIP19.5■□□□□ 0.71
ACTB-207ENST00000462494 PPARAQ07869 468 aa19.5■□□□□ 0.71
ACTB-207ENST00000462494 ITPK1Q13572 414 aa19.5■□□□□ 0.71
ACTB-207ENST00000462494 NYAP1Q6ZVC0 841 aa19.5■□□□□ 0.71
ACTB-207ENST00000462494 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
ACTB-207ENST00000462494 UBAC1Q9BSL1 405 aa19.5■□□□□ 0.71
ACTB-207ENST00000462494 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
ACTB-207ENST00000462494 ADAMTS2O95450 1211 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 ATP2B1P20020 1258 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 NAA30Q147X3 362 aaPredicted RBP19.49■□□□□ 0.71
ACTB-207ENST00000462494 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms