RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 GPR108Q9NPR9 543 aa15.36■□□□□ 0.05
HDAC4-207ENST00000461113 MTMR10Q9NXD2 777 aa15.36■□□□□ 0.05
HDAC4-207ENST00000461113 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 APBB1O00213 710 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 FGFR2P21802 821 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 GYG1P46976 350 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 TNFAIP1Q13829 316 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 C17orf99Q6UX52 265 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 CLASRPQ8N2M8 674 aaKnown RBP15.35■□□□□ 0.05
HDAC4-207ENST00000461113 FAM84BQ96KN1 310 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-207ENST00000461113 UNC93B1Q9H1C4 597 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-207ENST00000461113 ZNF70Q9UC06 446 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-207ENST00000461113 JAG2Q9Y219 1238 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 ZSWIM8A7E2V4 1837 aa15.35■□□□□ 0.05
HDAC4-207ENST00000461113 SPDYE5A6NIY4 337 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 SGPL1O95470 568 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 IL1R1P14778 569 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 TIMM10P62072 90 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 IRX6P78412 446 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-207ENST00000461113 SPDYE2Q495Y8 402 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 CCDC158Q5M9N0 1113 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 FBXO33Q7Z6M2 555 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC4-207ENST00000461113 SIRT2Q8IXJ6 389 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 GDF15Q99988 308 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 TMEM39BQ9GZU3 492 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 TDRD3Q9H7E2 651 aaKnown RBP15.34■□□□□ 0.05
HDAC4-207ENST00000461113 MYPNQ86TC9 1320 aa15.34■□□□□ 0.05
HDAC4-207ENST00000461113 UNC80Q8N2C7 3258 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 TCP10L2B9ZVM9 353 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 TFRCP02786 760 aaKnown RBP15.33■□□□□ 0.04
HDAC4-207ENST00000461113 BMP8BP34820 402 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 BCAMP50895 628 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 SNAPC2Q13487 334 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 TNNI3KQ59H18 835 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 XAGE2Q96GT9 111 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 PCDHB15Q9Y5E8 787 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 SNCAIPQ9Y6H5 919 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 FPGT-TNNI3KV9GXZ4 949 aa15.33■□□□□ 0.04
HDAC4-207ENST00000461113 IRF6O14896 467 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 SEMA3EO15041 775 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 IFIT2P09913 472 aaKnown RBP15.32■□□□□ 0.04
HDAC4-207ENST00000461113 PRKCZQ05513 592 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 TDRD7Q8NHU6 1098 aaKnown RBP15.32■□□□□ 0.04
HDAC4-207ENST00000461113 TBC1D22AQ8WUA7 517 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 LRRCC1Q9C099 1032 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 DCTPP1Q9H773 170 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 DENND2AQ9ULE3 1009 aa15.32■□□□□ 0.04
HDAC4-207ENST00000461113 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
HDAC4-207ENST00000461113 UQCRFS1P1P0C7P4 283 aa15.31■□□□□ 0.04
HDAC4-207ENST00000461113 FKBP1AP62942 108 aaKnown RBP15.31■□□□□ 0.04
HDAC4-207ENST00000461113 CHAF1AQ13111 956 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-207ENST00000461113 LRIT3Q3SXY7 679 aa15.31■□□□□ 0.04
HDAC4-207ENST00000461113 TTC39AQ5SRH9 613 aa15.31■□□□□ 0.04
HDAC4-207ENST00000461113 AACSQ86V21 672 aa15.31■□□□□ 0.04
HDAC4-207ENST00000461113 ZMYND8Q9ULU4 1186 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-207ENST00000461113 IRS2Q9Y4H2 1338 aa15.31■□□□□ 0.04
HDAC4-207ENST00000461113 HDAC1Q13547 482 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-207ENST00000461113 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
HDAC4-207ENST00000461113 C7orf61Q8IZ16 206 aa15.3■□□□□ 0.04
HDAC4-207ENST00000461113 SLAIN1Q8ND83 568 aa15.3■□□□□ 0.04
HDAC4-207ENST00000461113 WDR66Q8TBY9 1149 aa15.3■□□□□ 0.04
HDAC4-207ENST00000461113 ZKSCAN4Q969J2 545 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-207ENST00000461113 PAWRQ96IZ0 340 aaKnown RBP15.3■□□□□ 0.04
HDAC4-207ENST00000461113 OTOFQ9HC10 1997 aa15.3■□□□□ 0.04
HDAC4-207ENST00000461113 IL1RAPL2Q9NP60 686 aa15.3■□□□□ 0.04
HDAC4-207ENST00000461113 IQSEC3Q9UPP2 1182 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-207ENST00000461113 PDHXO00330 501 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 ADORA1P30542 326 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 TNNI2P48788 182 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 PPIL2Q13356 520 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
HDAC4-207ENST00000461113 GPATCH3Q96I76 525 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 DEFB118Q96PH6 123 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 WRNIP1Q96S55 665 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 CCDC8Q9H0W5 538 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-207ENST00000461113 PRDM6Q9NQX0 595 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 GABRQQ9UN88 632 aa15.29■□□□□ 0.04
HDAC4-207ENST00000461113 FAM205AQ6ZU69 1335 aa15.28■□□□□ 0.04
HDAC4-207ENST00000461113 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
HDAC4-207ENST00000461113 ADCY3O60266 1144 aa15.28■□□□□ 0.04
HDAC4-207ENST00000461113 PHKA1P46020 1223 aa15.28■□□□□ 0.04
HDAC4-207ENST00000461113 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
HDAC4-207ENST00000461113 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
HDAC4-207ENST00000461113 SERPINA10Q9UK55 444 aa15.28■□□□□ 0.04
HDAC4-207ENST00000461113 TTF2Q9UNY4 1162 aaKnown RBP15.28■□□□□ 0.04
HDAC4-207ENST00000461113 INHAP05111 366 aa15.27■□□□□ 0.04
HDAC4-207ENST00000461113 ELNP15502 786 aa15.27■□□□□ 0.04
HDAC4-207ENST00000461113 SYN1P17600 705 aa15.27■□□□□ 0.04
HDAC4-207ENST00000461113 FCGRTP55899 365 aa15.27■□□□□ 0.04
HDAC4-207ENST00000461113 SPTY2D1Q68D10 685 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-207ENST00000461113 TDHQ8IZJ6 230 aa15.27■□□□□ 0.04
HDAC4-207ENST00000461113 DIS3LQ8TF46 1054 aaKnown RBP15.27■□□□□ 0.04
HDAC4-207ENST00000461113 EAF2Q96CJ1 260 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-207ENST00000461113 DBNDD2Q9BQY9 259 aa15.27■□□□□ 0.04
HDAC4-207ENST00000461113 SUGT1Q9Y2Z0 365 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms