RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ZBTB47Q9UFB7 747 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-213ENST00000460211 MAP3K9P80192 1104 aa18.18■□□□□ 0.5
ATG4B-213ENST00000460211 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-213ENST00000460211 CFHR5Q9BXR6 569 aa18.18■□□□□ 0.5
ATG4B-213ENST00000460211 PIH1D3Q9NQM4 214 aaKnown RBP18.18■□□□□ 0.5
ATG4B-213ENST00000460211 FAM198AQ9UFP1 575 aa18.18■□□□□ 0.5
ATG4B-213ENST00000460211 TRIM17Q9Y577 477 aa18.18■□□□□ 0.5
ATG4B-213ENST00000460211 CSADQ9Y600 493 aa18.18■□□□□ 0.5
ATG4B-213ENST00000460211 RGS3P49796 1198 aa18.17■□□□□ 0.5
ATG4B-213ENST00000460211 IFNL1Q8IU54 200 aa18.17■□□□□ 0.5
ATG4B-213ENST00000460211 CDAN1Q8IWY9 1227 aa18.17■□□□□ 0.5
ATG4B-213ENST00000460211 ZNF384Q8TF68 577 aa18.17■□□□□ 0.5
ATG4B-213ENST00000460211 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
ATG4B-213ENST00000460211 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
ATG4B-213ENST00000460211 SSC5DA1L4H1 1573 aa18.17■□□□□ 0.5
ATG4B-213ENST00000460211 MYH2Q9UKX2 1941 aa18.16■□□□□ 0.5
ATG4B-213ENST00000460211 MANSC4A6NHS7 340 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-213ENST00000460211 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-213ENST00000460211 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
ATG4B-213ENST00000460211 ALDH1A1P00352 501 aa18.16■□□□□ 0.5
ATG4B-213ENST00000460211 PICALMQ13492 652 aa18.16■□□□□ 0.5
ATG4B-213ENST00000460211 CERS3Q8IU89 383 aa18.16■□□□□ 0.5
ATG4B-213ENST00000460211 WNK4Q96J92 1243 aa18.16■□□□□ 0.5
ATG4B-213ENST00000460211 ZNF341Q9BYN7 854 aa18.16■□□□□ 0.5
ATG4B-213ENST00000460211 IGF2BP3O00425 579 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATG4B-213ENST00000460211 WDHD1O75717 1129 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-213ENST00000460211 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-213ENST00000460211 ATP5JP18859 108 aa18.15■□□□□ 0.5
ATG4B-213ENST00000460211 CYP7A1P22680 504 aa18.15■□□□□ 0.5
ATG4B-213ENST00000460211 RHBDL3P58872 404 aa18.15■□□□□ 0.5
ATG4B-213ENST00000460211 PPP4CP60510 307 aa18.15■□□□□ 0.5
ATG4B-213ENST00000460211 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
ATG4B-213ENST00000460211 OTOP1Q7RTM1 612 aa18.15■□□□□ 0.5
ATG4B-213ENST00000460211 TEX11Q8IYF3 940 aa18.15■□□□□ 0.5
ATG4B-213ENST00000460211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATG4B-213ENST00000460211 DNAJC2Q99543 621 aaKnown RBP18.15■□□□□ 0.5
ATG4B-213ENST00000460211 AATFQ9NY61 560 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATG4B-213ENST00000460211 HTTP42858 3142 aa18.14■□□□□ 0.5
ATG4B-213ENST00000460211 POTEFA5A3E0 1075 aa18.14■□□□□ 0.49
ATG4B-213ENST00000460211 INHBEP58166 350 aa18.14■□□□□ 0.49
ATG4B-213ENST00000460211 MAGEB6Q8N7X4 407 aa18.14■□□□□ 0.49
ATG4B-213ENST00000460211 WRNIP1Q96S55 665 aa18.14■□□□□ 0.49
ATG4B-213ENST00000460211 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.49
ATG4B-213ENST00000460211 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.49
ATG4B-213ENST00000460211 NDUFB9Q9Y6M9 179 aa18.14■□□□□ 0.49
ATG4B-213ENST00000460211 GOLIM4O00461 696 aa18.13■□□□□ 0.49
ATG4B-213ENST00000460211 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-213ENST00000460211 ZFPM1Q8IX07 1006 aa18.13■□□□□ 0.49
ATG4B-213ENST00000460211 GCC1Q96CN9 775 aa18.13■□□□□ 0.49
ATG4B-213ENST00000460211 ELP3Q9H9T3 547 aa18.13■□□□□ 0.49
ATG4B-213ENST00000460211 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
ATG4B-213ENST00000460211 HDAC1Q13547 482 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-213ENST00000460211 VGLL4Q14135 290 aa18.12■□□□□ 0.49
ATG4B-213ENST00000460211 CD99L2Q8TCZ2 262 aa18.12■□□□□ 0.49
ATG4B-213ENST00000460211 SH3RF3Q8TEJ3 882 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-213ENST00000460211 HAUS7Q99871 368 aa18.12■□□□□ 0.49
ATG4B-213ENST00000460211 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.12■□□□□ 0.49
ATG4B-213ENST00000460211 RWDD1Q9H446 243 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-213ENST00000460211 DDX4Q9NQI0 724 aaKnown RBP18.12■□□□□ 0.49
ATG4B-213ENST00000460211 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
ATG4B-213ENST00000460211 GJA5P36382 358 aa18.11■□□□□ 0.49
ATG4B-213ENST00000460211 CRHR2Q13324 411 aa18.11■□□□□ 0.49
ATG4B-213ENST00000460211 SLC9C2Q5TAH2 1124 aa18.11■□□□□ 0.49
ATG4B-213ENST00000460211 OPTNQ96CV9 577 aa18.11■□□□□ 0.49
ATG4B-213ENST00000460211 RFX7Q2KHR2 1363 aa18.11■□□□□ 0.49
ATG4B-213ENST00000460211 LAMB1P07942 1786 aa18.11■□□□□ 0.49
ATG4B-213ENST00000460211 CENPFP49454 3210 aa18.11■□□□□ 0.49
ATG4B-213ENST00000460211 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
ATG4B-213ENST00000460211 OTUD7BQ6GQQ9 843 aa18.1■□□□□ 0.49
ATG4B-213ENST00000460211 ADGRA1Q86SQ6 560 aa18.1■□□□□ 0.49
ATG4B-213ENST00000460211 ERO1BQ86YB8 467 aa18.1■□□□□ 0.49
ATG4B-213ENST00000460211 TGFBRAP1Q8WUH2 860 aa18.1■□□□□ 0.49
ATG4B-213ENST00000460211 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
ATG4B-213ENST00000460211 OSBPL5Q9H0X9 879 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-213ENST00000460211 DHX36Q9H2U1 1008 aaKnown RBP18.1■□□□□ 0.49
ATG4B-213ENST00000460211 OTOFQ9HC10 1997 aa18.1■□□□□ 0.49
ATG4B-213ENST00000460211 DDTLA6NHG4 134 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-213ENST00000460211 ANKRD45Q5TZF3 282 aa18.09■□□□□ 0.49
ATG4B-213ENST00000460211 ZSCAN25Q6NSZ9 544 aa18.09■□□□□ 0.49
ATG4B-213ENST00000460211 SH3BP5LQ7L8J4 393 aa18.09■□□□□ 0.49
ATG4B-213ENST00000460211 EXOC6Q8TAG9 804 aa18.09■□□□□ 0.49
ATG4B-213ENST00000460211 ZKSCAN4Q969J2 545 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-213ENST00000460211 ZNF112Q9UJU3 913 aa18.09■□□□□ 0.49
ATG4B-213ENST00000460211 PTPN22Q9Y2R2 807 aa18.09■□□□□ 0.49
ATG4B-213ENST00000460211 AK9Q5TCS8 1911 aa18.08■□□□□ 0.49
ATG4B-213ENST00000460211 MAGEB6P1A0A0J9YX57 407 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 SPDYE5A6NIY4 337 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 ERC2O15083 957 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 TBC1D12O60347 775 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 PDE6AP16499 860 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 INPP5BP32019 993 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 USP5P45974 858 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 GTF2A2P52657 109 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 MIGA1Q8NAN2 632 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 OTUD5Q96G74 571 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 PTPN18Q99952 460 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 PI4KBQ9UBF8 816 aa18.08■□□□□ 0.48
ATG4B-213ENST00000460211 ATRNL1Q5VV63 1379 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 TTC41PQ6P2S7 1318 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 DYNLL1P63167 89 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms