RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ATG3Q9NT62 314 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 CPDO75976 1380 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 JMYQ8N9B5 988 aa22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 FAM217BQ9NTX9 383 aaPredicted RBP22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 TJP1Q07157 1748 aa22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 KARSQ15046 597 aaKnown RBP22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 ZBTB38Q8NAP3 1195 aaPredicted RBP22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 UBXN4Q92575 508 aa22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 INTS13Q9NVM9 706 aa22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 MYO5AQ9Y4I1 1855 aaKnown RBP22.51■■□□□ 1.19
CNEP1R1-203ENST00000458059 ANKRD18BA2A2Z9 1011 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 IRS4O14654 1257 aaPredicted RBP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 IL2RBP14784 551 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 CPLX3Q8WVH0 158 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 LY9Q9HBG7 655 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 SERTAD1Q9UHV2 236 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 KIF1AQ12756 1690 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 KIF20AO95235 890 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 PCCAP05165 728 aaPredicted RBP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 DIS3L2Q8IYB7 885 aaKnown RBP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 IGDCC4Q8TDY8 1250 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 HPSEQ9Y251 543 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 PSDA5PKW4 1024 aaPredicted RBP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 ERVV-2B6SEH9 535 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 KIF2AO00139 706 aaPredicted RBP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 POLR3GO15318 223 aaPredicted RBP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 CDKL5O76039 1030 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 FBXL16Q8N461 479 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 EPB41L4AQ9HCS5 686 aaPredicted RBP22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 TUBE1Q9UJT0 475 aa22.5■■□□□ 1.19
CNEP1R1-203ENST00000458059 STX17P56962 302 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 SSRP1Q08945 709 aaKnown RBP22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 NTRK3Q16288 839 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 RESP18Q5W5W9 173 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 NFE2L3Q9Y4A8 694 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 RIC1Q4ADV7 1423 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 GNG11P61952 73 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 TERF2Q15554 542 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 CREBRFQ8IUR6 639 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 OXER1Q8TDS5 423 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 L2HGDHQ9H9P8 463 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 PCDHB6Q9Y5E3 794 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 MST1RQ04912 1400 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 GLI3P10071 1580 aa22.49■■□□□ 1.19
CNEP1R1-203ENST00000458059 SPATA31A3Q5VYP0 1347 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 FAM205CA6NFA0 338 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 IKBKBO14920 756 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 TOGARAM2Q6ZUX3 1019 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 WDR24Q96S15 920 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 IRX2Q9BZI1 471 aaPredicted RBP22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 SEC31BQ9NQW1 1179 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 SAMSN1Q9NSI8 373 aaKnown RBP22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 TRIM65Q6PJ69 517 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 VSTM4Q8IW00 320 aa22.48■■□□□ 1.19
CNEP1R1-203ENST00000458059 AFMP43652 599 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 MTF1Q14872 753 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 NLRP10Q86W26 655 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 PIGBQ92521 554 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 STRBPQ96SI9 672 aaKnown RBP22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 BAZ2BQ9UIF8 2168 aaKnown RBP22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 TDO2P48775 406 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 TOB1P50616 345 aaPredicted RBP22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 IFNL3Q8IZI9 196 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 KRI1Q8N9T8 703 aaKnown RBP22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 STAMQ92783 540 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 CSF1RP07333 972 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 CTSWP56202 376 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 TEX35Q5T0J7 233 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 REXO1L1PQ8IX06 675 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 MAN1B1Q9UKM7 699 aa22.47■■□□□ 1.19
CNEP1R1-203ENST00000458059 ALS2Q96Q42 1657 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 PPP6R2O75170 966 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 CCDC93Q567U6 631 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 PPP2R2CQ9Y2T4 447 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 TNS3Q68CZ2 1445 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 CBFA2T2O43439 604 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 PDE8BO95263 885 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 NOSTRINQ8IVI9 506 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 SMYD4Q8IYR2 804 aaPredicted RBP22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 TRERF1Q96PN7 1200 aa22.46■■□□□ 1.19
CNEP1R1-203ENST00000458059 A0A0U1RQJ8 604 aa22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 MINDY4BA8MYZ0 360 aa22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 GABPB1Q06547 395 aaPredicted RBP22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 ATRIPQ8WXE1 791 aa22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 POSTNQ15063 836 aa22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 BAG1Q99933 345 aaPredicted RBP22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 ZBTB1Q9Y2K1 713 aa22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 COL18A1P39060 1754 aa22.45■■□□□ 1.18
CNEP1R1-203ENST00000458059 VWA3AA6NCI4 1184 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 CUTAO60888 179 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 PRDM1O75626 825 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 ZBTB22O15209 634 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 HSPA2P54652 639 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 RASGRF1Q13972 1273 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 SAFBQ15424 915 aaKnown RBP eCLIP22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 DHX58Q96C10 678 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms