RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 DOCK2Q92608 1830 aa23.26■■□□□ 1.31
MSH6-206ENST00000455383 CCL5P13501 91 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 PTPRAP18433 802 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 PRKCZQ05513 592 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 CCDC102BQ68D86 513 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 FASTKD5Q7L8L6 764 aaKnown RBP23.25■■□□□ 1.31
MSH6-206ENST00000455383 ZGPATQ8N5A5 531 aaKnown RBP23.25■■□□□ 1.31
MSH6-206ENST00000455383 SLC45A1Q9Y2W3 748 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 AFG3L2Q9Y4W6 797 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 ZHX2Q9Y6X8 837 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 CEP290O15078 2479 aa23.25■■□□□ 1.31
MSH6-206ENST00000455383 ADORA1P30542 326 aa23.24■■□□□ 1.31
MSH6-206ENST00000455383 CDCA7LQ96GN5 454 aa23.24■■□□□ 1.31
MSH6-206ENST00000455383 PA2G4Q9UQ80 394 aaKnown RBP23.24■■□□□ 1.31
MSH6-206ENST00000455383 LRRFIP2Q9Y608 721 aaKnown RBP23.24■■□□□ 1.31
MSH6-206ENST00000455383 MYH2Q9UKX2 1941 aa23.23■■□□□ 1.31
MSH6-206ENST00000455383 SLAIN1Q8ND83 568 aa23.23■■□□□ 1.31
MSH6-206ENST00000455383 GABRQQ9UN88 632 aa23.23■■□□□ 1.31
MSH6-206ENST00000455383 HDAC5Q9UQL6 1122 aa23.23■■□□□ 1.31
MSH6-206ENST00000455383 MGAMO43451 1857 aa23.23■■□□□ 1.31
MSH6-206ENST00000455383 DDTLA6NHG4 134 aaPredicted RBP23.22■■□□□ 1.31
MSH6-206ENST00000455383 UBXN2AP68543 259 aa23.22■■□□□ 1.31
MSH6-206ENST00000455383 RASGRF1Q13972 1273 aa23.22■■□□□ 1.31
MSH6-206ENST00000455383 RNF208Q9H0X6 261 aa23.22■■□□□ 1.31
MSH6-206ENST00000455383 DDX4Q9NQI0 724 aaKnown RBP23.22■■□□□ 1.31
MSH6-206ENST00000455383 PICK1Q9NRD5 415 aa23.22■■□□□ 1.31
MSH6-206ENST00000455383 CT47B1P0C2W7 299 aaPredicted RBP23.21■■□□□ 1.31
MSH6-206ENST00000455383 NOB1Q9ULX3 412 aaKnown RBP23.21■■□□□ 1.31
MSH6-206ENST00000455383 TRIOBPQ9H2D6 2365 aa23.21■■□□□ 1.31
MSH6-206ENST00000455383 PTPRFP10586 1907 aa23.2■■□□□ 1.3
MSH6-206ENST00000455383 PHIPQ8WWQ0 1821 aa23.2■■□□□ 1.3
MSH6-206ENST00000455383 CTNND1O60716 968 aaKnown RBP23.2■■□□□ 1.3
MSH6-206ENST00000455383 SLURP2P0DP57 97 aa23.2■■□□□ 1.3
MSH6-206ENST00000455383 CHRDL2Q6WN34 429 aa23.2■■□□□ 1.3
MSH6-206ENST00000455383 DZIP1Q86YF9 867 aaKnown RBP23.2■■□□□ 1.3
MSH6-206ENST00000455383 SLF2Q8IX21 1173 aa23.2■■□□□ 1.3
MSH6-206ENST00000455383 DPF3Q92784 378 aa23.2■■□□□ 1.3
MSH6-206ENST00000455383 API5Q9BZZ5 524 aaKnown RBP23.2■■□□□ 1.3
MSH6-206ENST00000455383 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
MSH6-206ENST00000455383 RHBDL3P58872 404 aa23.19■■□□□ 1.3
MSH6-206ENST00000455383 TIMM10P62072 90 aa23.19■■□□□ 1.3
MSH6-206ENST00000455383 ZSCAN29Q8IWY8 852 aaPredicted RBP23.19■■□□□ 1.3
MSH6-206ENST00000455383 U2AF1L4Q8WU68 220 aaKnown RBP23.19■■□□□ 1.3
MSH6-206ENST00000455383 HTATIP2Q9BUP3 242 aa23.19■■□□□ 1.3
MSH6-206ENST00000455383 PRO3102Q9H379 93 aa23.19■■□□□ 1.3
MSH6-206ENST00000455383 DOCK1Q14185 1865 aa23.19■■□□□ 1.3
MSH6-206ENST00000455383 MROH7-TTC4A0A0A0MT08 1334 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 GPR75-ASB3A0A0A6YYF3 556 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 TBC1D12O60347 775 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 BTDP43251 543 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 IRF5Q13568 498 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 SPTY2D1Q68D10 685 aaPredicted RBP23.18■■□□□ 1.3
MSH6-206ENST00000455383 GADL1Q6ZQY3 521 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 PXYLP1Q8TE99 480 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 ZNF384Q8TF68 577 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 MEIS3Q99687 375 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 UNC93B1Q9H1C4 597 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 RBM27Q9P2N5 1060 aaKnown RBP23.18■■□□□ 1.3
MSH6-206ENST00000455383 BIN2Q9UBW5 565 aaPredicted RBP23.18■■□□□ 1.3
MSH6-206ENST00000455383 ABCF2Q9UG63 623 aa23.18■■□□□ 1.3
MSH6-206ENST00000455383 ADCY3O60266 1144 aa23.17■■□□□ 1.3
MSH6-206ENST00000455383 SGPL1O95470 568 aa23.17■■□□□ 1.3
MSH6-206ENST00000455383 CAPN2P17655 700 aa23.17■■□□□ 1.3
MSH6-206ENST00000455383 FLT3LGP49771 235 aa23.17■■□□□ 1.3
MSH6-206ENST00000455383 XAGE2Q96GT9 111 aa23.17■■□□□ 1.3
MSH6-206ENST00000455383 A0A1B0GUL7 405 aa23.16■■□□□ 1.3
MSH6-206ENST00000455383 AGTPBP1Q9UPW5 1226 aa23.16■■□□□ 1.3
MSH6-206ENST00000455383 SZT2Q5T011 3432 aa23.15■■□□□ 1.3
MSH6-206ENST00000455383 FARP2O94887 1054 aaPredicted RBP23.15■■□□□ 1.3
MSH6-206ENST00000455383 MECOMQ03112 1051 aa23.15■■□□□ 1.3
MSH6-206ENST00000455383 PICALMQ13492 652 aa23.15■■□□□ 1.3
MSH6-206ENST00000455383 MTX1Q13505 466 aa23.15■■□□□ 1.3
MSH6-206ENST00000455383 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.15■■□□□ 1.3
MSH6-206ENST00000455383 AKAP2Q9Y2D5 859 aa23.15■■□□□ 1.3
MSH6-206ENST00000455383 RANBP2P49792 3224 aaKnown RBP23.15■■□□□ 1.3
MSH6-206ENST00000455383 COL2A1P02458 1487 aaPredicted RBP23.14■■□□□ 1.29
MSH6-206ENST00000455383 TRIM75PA6NK02 468 aa23.14■■□□□ 1.29
MSH6-206ENST00000455383 MAP4K4O95819 1239 aaPredicted RBP23.14■■□□□ 1.29
MSH6-206ENST00000455383 INHAP05111 366 aa23.14■■□□□ 1.29
MSH6-206ENST00000455383 ELNP15502 786 aa23.14■■□□□ 1.29
MSH6-206ENST00000455383 TFCP2Q12800 502 aa23.14■■□□□ 1.29
MSH6-206ENST00000455383 MVPQ14764 893 aaKnown RBP23.14■■□□□ 1.29
MSH6-206ENST00000455383 ERICH6Q7L0X2 663 aa23.14■■□□□ 1.29
MSH6-206ENST00000455383 CCDC84Q86UT8 332 aaPredicted RBP23.14■■□□□ 1.29
MSH6-206ENST00000455383 SMCR8Q8TEV9 937 aaPredicted RBP23.14■■□□□ 1.29
MSH6-206ENST00000455383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.14■■□□□ 1.29
MSH6-206ENST00000455383 TNPO2O14787 897 aaKnown RBP23.13■■□□□ 1.29
MSH6-206ENST00000455383 ZBTB7BO15156 539 aaPredicted RBP23.13■■□□□ 1.29
MSH6-206ENST00000455383 PAK6Q9NQU5 681 aaPredicted RBP23.13■■□□□ 1.29
MSH6-206ENST00000455383 NR2E3Q9Y5X4 410 aa23.13■■□□□ 1.29
MSH6-206ENST00000455383 FAM110CQ1W6H9 321 aa23.12■■□□□ 1.29
MSH6-206ENST00000455383 TREML2Q5T2D2 321 aa23.12■■□□□ 1.29
MSH6-206ENST00000455383 PROCA1Q8NCQ7 364 aaPredicted RBP23.12■■□□□ 1.29
MSH6-206ENST00000455383 ARHGAP45Q92619 1136 aa23.12■■□□□ 1.29
MSH6-206ENST00000455383 NSUN4Q96CB9 384 aaKnown RBP23.12■■□□□ 1.29
MSH6-206ENST00000455383 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
MSH6-206ENST00000455383 OSBPL5Q9H0X9 879 aaPredicted RBP23.12■■□□□ 1.29
MSH6-206ENST00000455383 HMG20BQ9P0W2 317 aa23.12■■□□□ 1.29
MSH6-206ENST00000455383 SRGAP3O43295 1099 aa23.11■■□□□ 1.29
MSH6-206ENST00000455383 GNAI3P08754 354 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms