RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ARPP21Q9UBL0 812 aaPredicted RBP13.44□□□□□ -0.26
TRAF4-206ENST00000454852 EPHX2P34913 555 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 USP5P45974 858 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
TRAF4-206ENST00000454852 NFIAQ12857 509 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 TSGA10IPQ3SY00 556 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 TBC1D10BQ4KMP7 808 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-206ENST00000454852 PNMA8AQ86V59 439 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-206ENST00000454852 TGFBRAP1Q8WUH2 860 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-206ENST00000454852 TAF1DQ9H5J8 278 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-206ENST00000454852 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 ANAPC4Q9UJX5 808 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 RBM8AQ9Y5S9 174 aaKnown RBP13.43□□□□□ -0.26
TRAF4-206ENST00000454852 ROBO3Q96MS0 1386 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 LAMB1P07942 1786 aa13.43□□□□□ -0.26
TRAF4-206ENST00000454852 NT5C2P49902 561 aa13.42□□□□□ -0.26
TRAF4-206ENST00000454852 ANAPC15P60006 121 aa13.42□□□□□ -0.26
TRAF4-206ENST00000454852 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
TRAF4-206ENST00000454852 FAM151AQ8WW52 585 aa13.42□□□□□ -0.26
TRAF4-206ENST00000454852 NAPBQ9H115 298 aa13.42□□□□□ -0.26
TRAF4-206ENST00000454852 DHX36Q9H2U1 1008 aaKnown RBP13.42□□□□□ -0.26
TRAF4-206ENST00000454852 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
TRAF4-206ENST00000454852 DDX4Q9NQI0 724 aaKnown RBP13.42□□□□□ -0.26
TRAF4-206ENST00000454852 CNTNAP1P78357 1384 aa13.42□□□□□ -0.26
TRAF4-206ENST00000454852 MYH1P12882 1939 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 APPP05067 770 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 FGRP09769 529 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 PCP11498 1178 aaKnown RBP13.41□□□□□ -0.26
TRAF4-206ENST00000454852 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-206ENST00000454852 TDO2P48775 406 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 IMMTQ16891 758 aaKnown RBP13.41□□□□□ -0.26
TRAF4-206ENST00000454852 C12orf60Q5U649 245 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 RNF20Q5VTR2 975 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
TRAF4-206ENST00000454852 APOBEC3FQ8IUX4 373 aaKnown RBP13.41□□□□□ -0.26
TRAF4-206ENST00000454852 EHD4Q9H223 541 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 PPP2R3BQ9Y5P8 575 aa13.41□□□□□ -0.26
TRAF4-206ENST00000454852 BAZ2AQ9UIF9 1905 aaKnown RBP13.41□□□□□ -0.26
TRAF4-206ENST00000454852 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 USP17L21D6R901 530 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 CYP21A2P08686 494 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 MCCP23508 829 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 TNNI2P48788 182 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
TRAF4-206ENST00000454852 CREB3L3Q68CJ9 461 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 MAPKAPK5Q8IW41 473 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 TBC1D32Q96NH3 1257 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 C22orf23Q9BZE7 217 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
TRAF4-206ENST00000454852 SIPA1L1O43166 1804 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 ZNF213O14771 459 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 SLC27A2O14975 620 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 CACNB3P54284 484 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 PPARAQ07869 468 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 ANGEL2Q5VTE6 544 aaKnown RBP13.39□□□□□ -0.27
TRAF4-206ENST00000454852 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 AMOTL1Q8IY63 956 aa13.39□□□□□ -0.27
TRAF4-206ENST00000454852 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-206ENST00000454852 ZKSCAN1P17029 563 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-206ENST00000454852 GABPAQ06546 454 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 PICALMQ13492 652 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 KRT32Q14532 448 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 FOXP4Q8IVH2 680 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-206ENST00000454852 ZFPM1Q8IX07 1006 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 TEPSINQ96N21 525 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 GGA3Q9NZ52 723 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 PI4KBQ9UBF8 816 aa13.38□□□□□ -0.27
TRAF4-206ENST00000454852 DDTLA6NHG4 134 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-206ENST00000454852 TCP10L2B9ZVM9 353 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 TBC1D12O60347 775 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-206ENST00000454852 HLA-DOAP06340 250 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 RASA3Q14644 834 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 TM6SF1Q9BZW5 370 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 DEFB129Q9H1M3 183 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 RNF41Q9H4P4 317 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-206ENST00000454852 RRAGCQ9HB90 399 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAF4-206ENST00000454852 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
TRAF4-206ENST00000454852 ORC4O43929 436 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 SLC3A2P08195 630 aaKnown RBP13.36□□□□□ -0.27
TRAF4-206ENST00000454852 PLCD1P51178 756 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 TCP10Q12799 353 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 AKNAD1Q5T1N1 836 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 C16orf86Q6ZW13 317 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms