RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SOGA3Q5TF21 947 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 SPON1Q9HCB6 807 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 ALPK3Q96L96 1907 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 PRKAB2O43741 272 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 TTF1Q15361 905 aaPredicted RBP6.01□□□□□ -1.45
RIF1-207ENST00000454583 C12orf60Q5U649 245 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 CDC42EP5Q6NZY7 148 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 C16orf86Q6ZW13 317 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 CYB5R4Q7L1T6 521 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 FGAP02671 866 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 SHMT1P34896 483 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 CLCN6P51797 869 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.01□□□□□ -1.45
RIF1-207ENST00000454583 CDAN1Q8IWY9 1227 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 SH3RF3Q8TEJ3 882 aaPredicted RBP6.01□□□□□ -1.45
RIF1-207ENST00000454583 ADGRA2Q96PE1 1338 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 PATL2C9JE40 543 aaKnown RBP6□□□□□ -1.45
RIF1-207ENST00000454583 GOLIM4O00461 696 aa6□□□□□ -1.45
RIF1-207ENST00000454583 ASTN2O75129 1339 aaPredicted RBP6□□□□□ -1.45
RIF1-207ENST00000454583 UFL1O94874 794 aa6□□□□□ -1.45
RIF1-207ENST00000454583 LARGE1O95461 756 aa6□□□□□ -1.45
RIF1-207ENST00000454583 IFIT1P09914 478 aaKnown RBP6□□□□□ -1.45
RIF1-207ENST00000454583 NT5C2P49902 561 aa6□□□□□ -1.45
RIF1-207ENST00000454583 DYNLL1P63167 89 aaKnown RBP6□□□□□ -1.45
RIF1-207ENST00000454583 DALRD3Q5D0E6 543 aaKnown RBP6□□□□□ -1.45
RIF1-207ENST00000454583 RUFY3Q7L099 469 aa6□□□□□ -1.45
RIF1-207ENST00000454583 SMARCC2Q8TAQ2 1214 aa6□□□□□ -1.45
RIF1-207ENST00000454583 RPGRQ92834 1020 aaKnown RBP6□□□□□ -1.45
RIF1-207ENST00000454583 DDRGK1Q96HY6 314 aa6□□□□□ -1.45
RIF1-207ENST00000454583 C22orf23Q9BZE7 217 aa6□□□□□ -1.45
RIF1-207ENST00000454583 SENP2Q9HC62 589 aa6□□□□□ -1.45
RIF1-207ENST00000454583 ZNRF3Q9ULT6 936 aa6□□□□□ -1.45
RIF1-207ENST00000454583 A0A0G2JS52 829 aa6□□□□□ -1.45
RIF1-207ENST00000454583 ERC2O15083 957 aa6□□□□□ -1.45
RIF1-207ENST00000454583 MYT1Q01538 1121 aa6□□□□□ -1.45
RIF1-207ENST00000454583 RAB3GAP1Q15042 981 aa6□□□□□ -1.45
RIF1-207ENST00000454583 CREB3L3Q68CJ9 461 aa6□□□□□ -1.45
RIF1-207ENST00000454583 SGMS1Q86VZ5 419 aa6□□□□□ -1.45
RIF1-207ENST00000454583 PLCD3Q8N3E9 789 aa6□□□□□ -1.45
RIF1-207ENST00000454583 GPAA1O43292 621 aa6□□□□□ -1.45
RIF1-207ENST00000454583 RPS12P25398 132 aaKnown RBP6□□□□□ -1.45
RIF1-207ENST00000454583 IFNL3Q8IZI9 196 aa6□□□□□ -1.45
RIF1-207ENST00000454583 CNTROBQ8N137 903 aa6□□□□□ -1.45
RIF1-207ENST00000454583 GPC2Q8N158 579 aa6□□□□□ -1.45
RIF1-207ENST00000454583 CNNM1Q9NRU3 951 aa6□□□□□ -1.45
RIF1-207ENST00000454583 RGS3P49796 1198 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 WASHC4Q2M389 1173 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 WDR66Q8TBY9 1149 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 DEFB129Q9H1M3 183 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 SYNPO2Q9UMS6 1093 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 MORC2Q9Y6X9 1032 aaPredicted RBP5.99□□□□□ -1.45
RIF1-207ENST00000454583 PTPRSQ13332 1948 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 FAM177BA6PVY3 158 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 PLCD1P51178 756 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 KIAA1755Q5JYT7 1200 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 NOL9Q5SY16 702 aaKnown RBP5.99□□□□□ -1.45
RIF1-207ENST00000454583 DPP8Q6V1X1 898 aaPredicted RBP5.99□□□□□ -1.45
RIF1-207ENST00000454583 MKL1Q969V6 931 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 LY9Q9HBG7 655 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 ZNF277Q9NRM2 450 aaPredicted RBP5.99□□□□□ -1.45
RIF1-207ENST00000454583 ATG2AQ2TAZ0 1938 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 ANK1P16157 1881 aa5.99□□□□□ -1.45
RIF1-207ENST00000454583 USP17L3A6NCW0 530 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 USP17L4A6NCW7 530 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 WNT10BO00744 389 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 RCAN1P53805 252 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 NFIAQ12857 509 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 SHROOM1Q2M3G4 852 aaPredicted RBP5.98□□□□□ -1.45
RIF1-207ENST00000454583 TTLL5Q6EMB2 1281 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 USP17L1Q7RTZ2 530 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 ZNF804AQ7Z570 1209 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 FAM83AQ86UY5 434 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 SUPT20HQ8NEM7 779 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 CRYGNQ8WXF5 182 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 PRMT6Q96LA8 375 aaPredicted RBP5.98□□□□□ -1.45
RIF1-207ENST00000454583 MPHOSPH8Q99549 860 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 GPRC5DQ9NZD1 345 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 ADAMTS5Q9UNA0 930 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 DDTLA6NHG4 134 aaPredicted RBP5.98□□□□□ -1.45
RIF1-207ENST00000454583 E7EWF7 191 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 IFIT2P09913 472 aaKnown RBP5.98□□□□□ -1.45
RIF1-207ENST00000454583 FDPSP14324 419 aaKnown RBP5.98□□□□□ -1.45
RIF1-207ENST00000454583 HS6ST3Q8IZP7 471 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 TBC1D22AQ8WUA7 517 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 TNFRSF25Q93038 417 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 OSBPL5Q9H0X9 879 aaPredicted RBP5.98□□□□□ -1.45
RIF1-207ENST00000454583 FRMPD4Q14CM0 1322 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 HIP1O00291 1037 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 ADAMTS3O15072 1205 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 RASA1P20936 1047 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 DIXDC1Q155Q3 683 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 NFKBIBQ15653 356 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 MAP3K14Q99558 947 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 BRPF3Q9ULD4 1205 aa5.98□□□□□ -1.45
RIF1-207ENST00000454583 RBM8AQ9Y5S9 174 aaKnown RBP5.98□□□□□ -1.45
RIF1-207ENST00000454583 SH2B2O14492 632 aaPredicted RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 CRKP46108 304 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 MAGEB6Q8N7X4 407 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 TRPM4Q8TD43 1214 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 INCENPQ9NQS7 918 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms