RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 SLURP2P0DP57 97 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 MCAMP43121 646 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 ATP8B2P98198 1209 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 G3BP1Q13283 466 aaKnown RBP eCLIP22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 MOGSQ13724 837 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 SPTY2D1Q68D10 685 aaPredicted RBP22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 TBC1D9Q6ZT07 1266 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 SPATA5Q8NB90 893 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 ZFYVE28Q9HCC9 887 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 MAST2Q6P0Q8 1798 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 MKI67P46013 3256 aaKnown RBP22.85■■□□□ 1.25
UBE2D4-208ENST00000454350 DDTLA6NHG4 134 aaPredicted RBP22.85■■□□□ 1.25
UBE2D4-208ENST00000454350 BTDP43251 543 aa22.85■■□□□ 1.25
UBE2D4-208ENST00000454350 ERICH6Q7L0X2 663 aa22.85■■□□□ 1.25
UBE2D4-208ENST00000454350 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.85■■□□□ 1.25
UBE2D4-208ENST00000454350 C1orf115Q9H7X2 142 aa22.85■■□□□ 1.25
UBE2D4-208ENST00000454350 FOCADQ5VW36 1801 aa22.85■■□□□ 1.25
UBE2D4-208ENST00000454350 ZBED9Q6R2W3 1325 aa22.84■■□□□ 1.25
UBE2D4-208ENST00000454350 SLF2Q8IX21 1173 aa22.84■■□□□ 1.25
UBE2D4-208ENST00000454350 NSUN4Q96CB9 384 aaKnown RBP22.84■■□□□ 1.25
UBE2D4-208ENST00000454350 EFCC1Q9HA90 598 aa22.84■■□□□ 1.25
UBE2D4-208ENST00000454350 GPR108Q9NPR9 543 aa22.84■■□□□ 1.25
UBE2D4-208ENST00000454350 SIPA1L1O43166 1804 aa22.84■■□□□ 1.25
UBE2D4-208ENST00000454350 ATAD5Q96QE3 1844 aa22.84■■□□□ 1.25
UBE2D4-208ENST00000454350 TLR2O60603 784 aa22.83■■□□□ 1.25
UBE2D4-208ENST00000454350 MGAMO43451 1857 aa22.82■■□□□ 1.24
UBE2D4-208ENST00000454350 TNNI3KQ59H18 835 aa22.82■■□□□ 1.24
UBE2D4-208ENST00000454350 NOP58Q9Y2X3 529 aaKnown RBP22.82■■□□□ 1.24
UBE2D4-208ENST00000454350 FPGT-TNNI3KV9GXZ4 949 aa22.82■■□□□ 1.24
UBE2D4-208ENST00000454350 ADGRA2Q96PE1 1338 aa22.82■■□□□ 1.24
UBE2D4-208ENST00000454350 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
UBE2D4-208ENST00000454350 GORABQ5T7V8 394 aa22.81■■□□□ 1.24
UBE2D4-208ENST00000454350 ARMC5Q96C12 935 aa22.81■■□□□ 1.24
UBE2D4-208ENST00000454350 DBNDD2Q9BQY9 259 aa22.81■■□□□ 1.24
UBE2D4-208ENST00000454350 UQCRFS1P1P0C7P4 283 aa22.8■■□□□ 1.24
UBE2D4-208ENST00000454350 ANKRD23Q86SG2 305 aa22.8■■□□□ 1.24
UBE2D4-208ENST00000454350 ITPRIPQ8IWB1 547 aa22.8■■□□□ 1.24
UBE2D4-208ENST00000454350 FTSJ3Q8IY81 847 aaKnown RBP22.8■■□□□ 1.24
UBE2D4-208ENST00000454350 ARHGAP39Q9C0H5 1083 aa22.8■■□□□ 1.24
UBE2D4-208ENST00000454350 COL2A1P02458 1487 aaPredicted RBP22.79■■□□□ 1.24
UBE2D4-208ENST00000454350 PICALMQ13492 652 aa22.79■■□□□ 1.24
UBE2D4-208ENST00000454350 GPAT2Q6NUI2 795 aa22.79■■□□□ 1.24
UBE2D4-208ENST00000454350 C17orf99Q6UX52 265 aa22.79■■□□□ 1.24
UBE2D4-208ENST00000454350 SCYL3Q8IZE3 742 aa22.79■■□□□ 1.24
UBE2D4-208ENST00000454350 POTEFA5A3E0 1075 aa22.78■■□□□ 1.24
UBE2D4-208ENST00000454350 CXCL11O14625 94 aa22.78■■□□□ 1.24
UBE2D4-208ENST00000454350 SURF6O75683 361 aaKnown RBP22.78■■□□□ 1.24
UBE2D4-208ENST00000454350 PTPRAP18433 802 aa22.78■■□□□ 1.24
UBE2D4-208ENST00000454350 CTGFP29279 349 aa22.78■■□□□ 1.24
UBE2D4-208ENST00000454350 LACTBP83111 547 aaPredicted RBP22.78■■□□□ 1.24
UBE2D4-208ENST00000454350 PDHXO00330 501 aa22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 GSTO1P78417 241 aa22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 ZSCAN29Q8IWY8 852 aaPredicted RBP22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 ZNF512BQ96KM6 892 aaPredicted RBP22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 SNRKQ9NRH2 765 aa22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 DBNLQ9UJU6 430 aaKnown RBP22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 AFG3L2Q9Y4W6 797 aa22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 PTCH2Q9Y6C5 1203 aa22.77■■□□□ 1.24
UBE2D4-208ENST00000454350 DOCK3Q8IZD9 2030 aa22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 TBC1D12O60347 775 aa22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 MAP4K4O95819 1239 aaPredicted RBP22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 CYP2E1P05181 493 aaPredicted RBP22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 LDHCP07864 332 aa22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 CEP85Q6P2H3 762 aa22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 PANK1Q8TE04 598 aa22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 TLR7Q9NYK1 1049 aaKnown RBP22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 RAI14Q9P0K7 980 aa22.76■■□□□ 1.23
UBE2D4-208ENST00000454350 CTNND1O60716 968 aaKnown RBP22.75■■□□□ 1.23
UBE2D4-208ENST00000454350 EAF2Q96CJ1 260 aaPredicted RBP22.75■■□□□ 1.23
UBE2D4-208ENST00000454350 LRP2BPQ9P2M1 347 aa22.75■■□□□ 1.23
UBE2D4-208ENST00000454350 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.75■■□□□ 1.23
UBE2D4-208ENST00000454350 CPA4Q9UI42 421 aa22.75■■□□□ 1.23
UBE2D4-208ENST00000454350 ZHX2Q9Y6X8 837 aa22.75■■□□□ 1.23
UBE2D4-208ENST00000454350 LOC285556D6RIA3 1793 aa22.75■■□□□ 1.23
UBE2D4-208ENST00000454350 A0A0G2JLL6 359 aaPredicted RBP22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 FAM196BA6NMK8 535 aa22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 OS9Q13438 667 aaPredicted RBP22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 TTC39AQ5SRH9 613 aa22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 PRRT2Q7Z6L0 340 aaPredicted RBP22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 ADGRA1Q86SQ6 560 aa22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 SH3RF3Q8TEJ3 882 aaPredicted RBP22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 ZNF333Q96JL9 665 aa22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 OSBPL5Q9H0X9 879 aaPredicted RBP22.74■■□□□ 1.23
UBE2D4-208ENST00000454350 RRP1BQ14684 758 aaKnown RBP22.73■■□□□ 1.23
UBE2D4-208ENST00000454350 ARHGEF6Q15052 776 aa22.73■■□□□ 1.23
UBE2D4-208ENST00000454350 CCDC158Q5M9N0 1113 aa22.73■■□□□ 1.23
UBE2D4-208ENST00000454350 PICK1Q9NRD5 415 aa22.73■■□□□ 1.23
UBE2D4-208ENST00000454350 MYH1P12882 1939 aa22.72■■□□□ 1.23
UBE2D4-208ENST00000454350 BCRP11274 1271 aa22.72■■□□□ 1.23
UBE2D4-208ENST00000454350 ZAP70P43403 619 aa22.72■■□□□ 1.23
UBE2D4-208ENST00000454350 PPP4CP60510 307 aa22.72■■□□□ 1.23
UBE2D4-208ENST00000454350 CCDC84Q86UT8 332 aaPredicted RBP22.72■■□□□ 1.23
UBE2D4-208ENST00000454350 PIH1D3Q9NQM4 214 aaKnown RBP22.72■■□□□ 1.23
UBE2D4-208ENST00000454350 TEX11Q8IYF3 940 aa22.71■■□□□ 1.23
UBE2D4-208ENST00000454350 TRIM47Q96LD4 638 aa22.71■■□□□ 1.23
UBE2D4-208ENST00000454350 CCDC8Q9H0W5 538 aaPredicted RBP22.71■■□□□ 1.23
UBE2D4-208ENST00000454350 GNRH1P01148 92 aa22.7■■□□□ 1.22
UBE2D4-208ENST00000454350 CYP2C8P10632 490 aa22.7■■□□□ 1.22
UBE2D4-208ENST00000454350 NAA16Q6N069 864 aaPredicted RBP22.7■■□□□ 1.22
UBE2D4-208ENST00000454350 AATFQ9NY61 560 aaKnown RBP eCLIP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms