RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 KIF23Q02241 960 aaPredicted RBP17.8■□□□□ 0.44
VPS16-205ENST00000453689 NUCB1Q02818 461 aa17.8■□□□□ 0.44
VPS16-205ENST00000453689 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
VPS16-205ENST00000453689 PICALMQ13492 652 aa17.8■□□□□ 0.44
VPS16-205ENST00000453689 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
VPS16-205ENST00000453689 AATFQ9NY61 560 aaKnown RBP eCLIP17.8■□□□□ 0.44
VPS16-205ENST00000453689 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
VPS16-205ENST00000453689 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
VPS16-205ENST00000453689 CASP8AP2Q9UKL3 1982 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 DDX60LQ5H9U9 1706 aaKnown RBP17.79■□□□□ 0.44
VPS16-205ENST00000453689 BAG3O95817 575 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 DCAF15Q66K64 600 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 SH3BP5LQ7L8J4 393 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 CHD1LQ86WJ1 897 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 TEX11Q8IYF3 940 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 ANKRD13AQ8IZ07 590 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 MAGEB6Q8N7X4 407 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS16-205ENST00000453689 SH3RF3Q8TEJ3 882 aaPredicted RBP17.79■□□□□ 0.44
VPS16-205ENST00000453689 AIDAQ96BJ3 306 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 SLC10A4Q96EP9 437 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 HAUS7Q99871 368 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
VPS16-205ENST00000453689 PTPRFP10586 1907 aa17.78■□□□□ 0.44
VPS16-205ENST00000453689 MYH8P13535 1937 aa17.78■□□□□ 0.44
VPS16-205ENST00000453689 COL2A1P02458 1487 aaPredicted RBP17.78■□□□□ 0.44
VPS16-205ENST00000453689 NPM3O75607 178 aaKnown RBP17.78■□□□□ 0.44
VPS16-205ENST00000453689 PPP4CP60510 307 aa17.78■□□□□ 0.44
VPS16-205ENST00000453689 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
VPS16-205ENST00000453689 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.78■□□□□ 0.44
VPS16-205ENST00000453689 MIGA2Q7L4E1 593 aa17.78■□□□□ 0.44
VPS16-205ENST00000453689 ECHDC1Q9NTX5 307 aa17.78■□□□□ 0.44
VPS16-205ENST00000453689 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
VPS16-205ENST00000453689 DDTLA6NHG4 134 aaPredicted RBP17.77■□□□□ 0.44
VPS16-205ENST00000453689 PLCG2P16885 1265 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 DYNLL1P63167 89 aaKnown RBP17.77■□□□□ 0.44
VPS16-205ENST00000453689 VGLL4Q14135 290 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 SPRYD7Q5W111 196 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 TMED8Q6PL24 325 aaPredicted RBP17.77■□□□□ 0.44
VPS16-205ENST00000453689 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
VPS16-205ENST00000453689 WNK4Q96J92 1243 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 WRNIP1Q96S55 665 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 CSRNP1Q96S65 589 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 BEGAINQ9BUH8 593 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 ZNF341Q9BYN7 854 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 LNPKQ9C0E8 428 aa17.77■□□□□ 0.44
VPS16-205ENST00000453689 PDE6AP16499 860 aa17.76■□□□□ 0.43
VPS16-205ENST00000453689 MAP3K9P80192 1104 aa17.76■□□□□ 0.43
VPS16-205ENST00000453689 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
VPS16-205ENST00000453689 MIGA1Q8NAN2 632 aa17.76■□□□□ 0.43
VPS16-205ENST00000453689 GPATCH3Q96I76 525 aa17.76■□□□□ 0.43
VPS16-205ENST00000453689 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
VPS16-205ENST00000453689 ELP3Q9H9T3 547 aa17.76■□□□□ 0.43
VPS16-205ENST00000453689 ZBTB48P10074 688 aaPredicted RBP17.75■□□□□ 0.43
VPS16-205ENST00000453689 GJA5P36382 358 aa17.75■□□□□ 0.43
VPS16-205ENST00000453689 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
VPS16-205ENST00000453689 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
VPS16-205ENST00000453689 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
VPS16-205ENST00000453689 TGFBRAP1Q8WUH2 860 aa17.75■□□□□ 0.43
VPS16-205ENST00000453689 ZNF112Q9UJU3 913 aa17.75■□□□□ 0.43
VPS16-205ENST00000453689 CSADQ9Y600 493 aa17.75■□□□□ 0.43
VPS16-205ENST00000453689 TCRBV5S4A2TA0A5A2 114 aa17.74■□□□□ 0.43
VPS16-205ENST00000453689 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
VPS16-205ENST00000453689 CTCFP49711 727 aaPredicted RBP17.74■□□□□ 0.43
VPS16-205ENST00000453689 ZKSCAN4Q969J2 545 aaPredicted RBP17.74■□□□□ 0.43
VPS16-205ENST00000453689 OPTNQ96CV9 577 aa17.74■□□□□ 0.43
VPS16-205ENST00000453689 SNCAIPQ9Y6H5 919 aa17.74■□□□□ 0.43
VPS16-205ENST00000453689 FLT1P17948 1338 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 TTC41PQ6P2S7 1318 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 SALL3Q9BXA9 1300 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 ZNF532Q9HCE3 1301 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 CA12O43570 354 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 SLURP2P0DP57 97 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 INPP5BP32019 993 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 MAP3K10Q02779 954 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 CERS3Q8IU89 383 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 MAPKAPK5Q8IW41 473 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 TSKSQ9UJT2 592 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
VPS16-205ENST00000453689 MX1P20591 662 aa17.72■□□□□ 0.43
VPS16-205ENST00000453689 ADD2P35612 726 aa17.72■□□□□ 0.43
VPS16-205ENST00000453689 TM4SF4P48230 202 aa17.72■□□□□ 0.43
VPS16-205ENST00000453689 LBX1P52954 281 aa17.72■□□□□ 0.43
VPS16-205ENST00000453689 SLFNL1Q499Z3 407 aa17.72■□□□□ 0.43
VPS16-205ENST00000453689 PI4K2BQ8TCG2 481 aa17.72■□□□□ 0.43
VPS16-205ENST00000453689 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
VPS16-205ENST00000453689 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.72■□□□□ 0.435e-6■■■■□ 24.2
VPS16-205ENST00000453689 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
VPS16-205ENST00000453689 MANSC4A6NHS7 340 aaPredicted RBP17.71■□□□□ 0.43
VPS16-205ENST00000453689 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
VPS16-205ENST00000453689 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
VPS16-205ENST00000453689 SREBF2Q12772 1141 aa17.71■□□□□ 0.43
VPS16-205ENST00000453689 RNF186Q9NXI6 227 aa17.71■□□□□ 0.43
VPS16-205ENST00000453689 SAGE1Q9NXZ1 904 aa17.71■□□□□ 0.43
VPS16-205ENST00000453689 FAM196BA6NMK8 535 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 ERC2O15083 957 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 TBC1D12O60347 775 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 TRPA1O75762 1119 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 CHGBP05060 677 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms