RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 C11orf91Q3C1V1 193 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 DHX32Q7L7V1 743 aaKnown RBP18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 NFE2L3Q9Y4A8 694 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 PI4KAP2A4QPH2 592 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 AMPD2Q01433 879 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.612e-6■■□□□ 13.7
CTNNB1-210ENST00000453024 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 METTL16Q86W50 562 aaKnown RBP18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 PI4KAP1Q8N8J0 262 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 ACRBPQ8NEB7 543 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 GJB4Q9NTQ9 266 aa18.89■□□□□ 0.61
CTNNB1-210ENST00000453024 TEX11Q8IYF3 940 aa18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 PCDHA5Q9Y5H7 936 aa18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 DLC1Q96QB1 1528 aa18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 PDIA3P30101 505 aaKnown RBP18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 RBL2Q08999 1139 aa18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 TRMT44Q8IYL2 757 aaKnown RBP18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 JMYQ8N9B5 988 aa18.88■□□□□ 0.61
CTNNB1-210ENST00000453024 KIAA0754O94854 1291 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 MYBL2P10244 700 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 SYNE3Q6ZMZ3 975 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 HPSEQ9Y251 543 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 KIF28PB7ZC32 967 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 IRF6O14896 467 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 ACTN3Q08043 901 aaPredicted RBP18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 NR1I3Q14994 352 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 IQCA1Q86XH1 822 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 MEFVO15553 781 aaPredicted RBP18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 TEX33O43247 280 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 WLSQ5T9L3 541 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 SHC4Q6S5L8 630 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 SELENOOQ9BVL4 669 aa18.87■□□□□ 0.61
CTNNB1-210ENST00000453024 KIF3CO14782 793 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 EIF2S2P20042 333 aaKnown RBP18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 NBPF20Q3BBV1 942 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 CHST3Q7LGC8 479 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 NBPF3Q9H094 633 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 SAMSN1Q9NSI8 373 aaKnown RBP18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 KLC4Q9NSK0 619 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 ATXN2Q99700 1313 aaKnown RBP18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 GOLGA6BA6NDN3 693 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 NDUFAB1O14561 156 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 FOXN1O15353 648 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 AMPHP49418 695 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 INHBEP58166 350 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 GRIPAP1Q4V328 841 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 C8orf76Q96K31 380 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 SH3GL2Q99962 352 aa18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 NAA15Q9BXJ9 866 aaKnown RBP18.86■□□□□ 0.61
CTNNB1-210ENST00000453024 RGPD1P0DJD0 1748 aa18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 MYO5BQ9ULV0 1848 aa18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 EXOSC10Q01780 885 aaKnown RBP18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 LONRF3Q496Y0 759 aa18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 B4GALNT4Q76KP1 1039 aa18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 NDUFB9Q9Y6M9 179 aa18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 ARHGAP25P42331 645 aa18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 HOOK1Q9UJC3 728 aaKnown RBP18.85■□□□□ 0.61
CTNNB1-210ENST00000453024 MCM3P25205 808 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 MMS19Q96T76 1030 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 AGXT2Q9BYV1 514 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 HMGB1P09429 215 aaKnown RBP18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 CALRP27797 417 aaKnown RBP18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 MRPL12P52815 198 aaKnown RBP18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 SLC39A14Q15043 492 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 PPFIBP1Q86W92 1011 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 MED15Q96RN5 788 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 CENPHQ9H3R5 247 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 ALKQ9UM73 1620 aa18.84■□□□□ 0.61
CTNNB1-210ENST00000453024 ZNF609O15014 1411 aa18.83■□□□□ 0.61
CTNNB1-210ENST00000453024 WASLO00401 505 aaPredicted RBP18.83■□□□□ 0.61
CTNNB1-210ENST00000453024 TEFQ10587 303 aa18.83■□□□□ 0.61
CTNNB1-210ENST00000453024 CRYMQ14894 314 aa18.83■□□□□ 0.61
CTNNB1-210ENST00000453024 BRAPQ7Z569 592 aa18.83■□□□□ 0.61
CTNNB1-210ENST00000453024 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.61
CTNNB1-210ENST00000453024 HDAC6Q9UBN7 1215 aa18.83■□□□□ 0.61
CTNNB1-210ENST00000453024 FRMD3A2A2Y4 597 aa18.83■□□□□ 0.6
CTNNB1-210ENST00000453024 ERCC3P19447 782 aa18.83■□□□□ 0.6
CTNNB1-210ENST00000453024 PDCLQ13371 301 aa18.83■□□□□ 0.6
CTNNB1-210ENST00000453024 ZNF827Q17R98 1081 aa18.83■□□□□ 0.6
CTNNB1-210ENST00000453024 TMED8Q6PL24 325 aaPredicted RBP18.83■□□□□ 0.6
CTNNB1-210ENST00000453024 LAMA4Q16363 1823 aa18.83■□□□□ 0.6
CTNNB1-210ENST00000453024 A0A0G2JLW4 131 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 A0A1B0GTH6 734 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 ANXA1P04083 346 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 FMNL3Q8IVF7 1028 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 TRIM6Q9C030 488 aaPredicted RBP18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 RBM28Q9NW13 759 aaKnown RBP18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 PEAK1Q9H792 1746 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 A1BGP04217 495 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 G3BP1Q13283 466 aaKnown RBP eCLIP18.82■□□□□ 0.61e-9■■■□□ 16.3
CTNNB1-210ENST00000453024 CCNI2Q6ZMN8 369 aaPredicted RBP18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 FAM43BQ6ZT52 329 aaPredicted RBP18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 ZNF274Q96GC6 653 aaPredicted RBP18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 MAN1B1Q9UKM7 699 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 RTN2O75298 545 aa18.82■□□□□ 0.6
CTNNB1-210ENST00000453024 RASSF9O75901 435 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms