RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 FLT3LGP49771 235 aa22.44■■□□□ 1.18
CHCHD3-203ENST00000448878 SSH1Q8WYL5 1049 aa22.44■■□□□ 1.18
CHCHD3-203ENST00000448878 A0A0G2JLL6 359 aaPredicted RBP22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 TRIM75PA6NK02 468 aa22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 PHF20L1A8MW92 1017 aa22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 PHKA1P46020 1223 aa22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 PICALMQ13492 652 aa22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 PRRT2Q7Z6L0 340 aaPredicted RBP22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 UBE2Q1Q7Z7E8 422 aa22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 DZIP1Q86YF9 867 aaKnown RBP22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 ABCF2Q9UG63 623 aa22.43■■□□□ 1.18
CHCHD3-203ENST00000448878 ENTPD3O75355 529 aa22.42■■□□□ 1.18
CHCHD3-203ENST00000448878 INHAP05111 366 aa22.42■■□□□ 1.18
CHCHD3-203ENST00000448878 UBTFL1P0CB47 393 aaPredicted RBP22.42■■□□□ 1.18
CHCHD3-203ENST00000448878 ZGPATQ8N5A5 531 aaKnown RBP22.42■■□□□ 1.18
CHCHD3-203ENST00000448878 DEFB118Q96PH6 123 aa22.42■■□□□ 1.18
CHCHD3-203ENST00000448878 AFG3L2Q9Y4W6 797 aa22.42■■□□□ 1.18
CHCHD3-203ENST00000448878 MGAMO43451 1857 aa22.42■■□□□ 1.18
CHCHD3-203ENST00000448878 ZBTB7BO15156 539 aaPredicted RBP22.41■■□□□ 1.18
CHCHD3-203ENST00000448878 SLURP2P0DP57 97 aa22.41■■□□□ 1.18
CHCHD3-203ENST00000448878 TRIOBPQ9H2D6 2365 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 SALL1Q9NSC2 1324 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 SEMA3EO15041 775 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 SLF2Q8IX21 1173 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 ANKRD13CQ8N6S4 541 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 COA7Q96BR5 231 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 IDI2Q9BXS1 227 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 CEP290O15078 2479 aa22.4■■□□□ 1.18
CHCHD3-203ENST00000448878 DDTLA6NHG4 134 aaPredicted RBP22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 CTNND1O60716 968 aaKnown RBP22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 CIAO1O76071 339 aa22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 SH3BP5LQ7L8J4 393 aa22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 CCDC84Q86UT8 332 aaPredicted RBP22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 SLC17A8Q8NDX2 589 aa22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 PXYLP1Q8TE99 480 aa22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 FBXO3Q9UK99 471 aa22.39■■□□□ 1.17
CHCHD3-203ENST00000448878 DOCK2Q92608 1830 aa22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 ADORA1P30542 326 aa22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 IL15P40933 162 aaPredicted RBP22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 BTDP43251 543 aa22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 CCDC102BQ68D86 513 aa22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 SMC4Q9NTJ3 1288 aa22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 PA2G4Q9UQ80 394 aaKnown RBP22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 SLC45A1Q9Y2W3 748 aa22.38■■□□□ 1.17
CHCHD3-203ENST00000448878 E9PSI1 815 aa22.37■■□□□ 1.17
CHCHD3-203ENST00000448878 IRF5Q13568 498 aa22.37■■□□□ 1.17
CHCHD3-203ENST00000448878 DDX4Q9NQI0 724 aaKnown RBP22.37■■□□□ 1.17
CHCHD3-203ENST00000448878 STAP2Q9UGK3 403 aa22.37■■□□□ 1.17
CHCHD3-203ENST00000448878 MYH2Q9UKX2 1941 aa22.37■■□□□ 1.17
CHCHD3-203ENST00000448878 ATRNL1Q5VV63 1379 aa22.37■■□□□ 1.17
CHCHD3-203ENST00000448878 ZNF521Q96K83 1311 aa22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 TIMM10P62072 90 aa22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 SPTY2D1Q68D10 685 aaPredicted RBP22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 PAWRQ96IZ0 340 aaKnown RBP22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 PRO3102Q9H379 93 aa22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 PNMA3Q9UL41 463 aa22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 AGTPBP1Q9UPW5 1226 aa22.36■■□□□ 1.17
CHCHD3-203ENST00000448878 GAKO14976 1311 aa22.35■■□□□ 1.17
CHCHD3-203ENST00000448878 FAM196BA6NMK8 535 aa22.34■■□□□ 1.17
CHCHD3-203ENST00000448878 RASGRF1Q13972 1273 aa22.34■■□□□ 1.17
CHCHD3-203ENST00000448878 TREML2Q5T2D2 321 aa22.34■■□□□ 1.17
CHCHD3-203ENST00000448878 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
CHCHD3-203ENST00000448878 NECAB2Q7Z6G3 386 aa22.34■■□□□ 1.17
CHCHD3-203ENST00000448878 HDAC5Q9UQL6 1122 aa22.34■■□□□ 1.17
CHCHD3-203ENST00000448878 DLL1O00548 723 aa22.33■■□□□ 1.17
CHCHD3-203ENST00000448878 CAPN2P17655 700 aa22.33■■□□□ 1.17
CHCHD3-203ENST00000448878 MAP3K10Q02779 954 aa22.33■■□□□ 1.17
CHCHD3-203ENST00000448878 SPP2Q13103 211 aa22.33■■□□□ 1.17
CHCHD3-203ENST00000448878 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
CHCHD3-203ENST00000448878 MROH7-TTC4A0A0A0MT08 1334 aa22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 SZT2Q5T011 3432 aa22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 FAM163AQ96GL9 167 aaPredicted RBP22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 LRCH3Q96II8 777 aa22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 NEUROD6Q96NK8 337 aa22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 PAK6Q9NQU5 681 aaPredicted RBP22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 DOCK1Q14185 1865 aa22.32■■□□□ 1.16
CHCHD3-203ENST00000448878 A0A1W2PPC1 479 aa22.31■■□□□ 1.16
CHCHD3-203ENST00000448878 SOX1O00570 391 aaPredicted RBP22.31■■□□□ 1.16
CHCHD3-203ENST00000448878 MECOMQ03112 1051 aa22.31■■□□□ 1.16
CHCHD3-203ENST00000448878 FAM110CQ1W6H9 321 aa22.31■■□□□ 1.16
CHCHD3-203ENST00000448878 C7orf61Q8IZ16 206 aa22.31■■□□□ 1.16
CHCHD3-203ENST00000448878 DIS3LQ8TF46 1054 aaKnown RBP22.31■■□□□ 1.16
CHCHD3-203ENST00000448878 NOB1Q9ULX3 412 aaKnown RBP22.31■■□□□ 1.16
CHCHD3-203ENST00000448878 A0A1B0GUL7 405 aa22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 HMGCS2P54868 508 aa22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 SLFN5Q08AF3 891 aa22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 PABPC4Q13310 644 aaKnown RBP eCLIP22.3■■□□□ 1.168e-7■■■□□ 16.9
CHCHD3-203ENST00000448878 GORABQ5T7V8 394 aa22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 PROCA1Q8NCQ7 364 aaPredicted RBP22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 XAGE2Q96GT9 111 aa22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 CRISPLD2Q9H0B8 497 aa22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 ZMYND8Q9ULU4 1186 aaPredicted RBP22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 AKAP2Q9Y2D5 859 aa22.3■■□□□ 1.16
CHCHD3-203ENST00000448878 RFX7Q2KHR2 1363 aa22.29■■□□□ 1.16
CHCHD3-203ENST00000448878 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
CHCHD3-203ENST00000448878 ZNF280CQ8ND82 737 aa22.29■■□□□ 1.16
CHCHD3-203ENST00000448878 OSBPL5Q9H0X9 879 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms