RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ALG1Q9BT22 464 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 ESF1Q9H501 851 aaKnown RBP15.93■□□□□ 0.14
VPS52-212ENST00000445902 MAN1B1Q9UKM7 699 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 DENND2AQ9ULE3 1009 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 MRC1P22897 1456 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 PXDNQ92626 1479 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 AKR1B15C9JRZ8 316 aaPredicted RBP15.93■□□□□ 0.14
VPS52-212ENST00000445902 RBL2Q08999 1139 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 PPM1EQ8WY54 764 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 RIN2Q8WYP3 895 aaPredicted RBP15.93■□□□□ 0.14
VPS52-212ENST00000445902 YY1AP1Q9H869 796 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 AMOTL2Q9Y2J4 779 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 GRIN1Q05586 938 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 PTPAQ15257 358 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 RESP18Q5W5W9 173 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 NCAPH2Q6IBW4 605 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 KLHL10Q6JEL2 608 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 SLIT1O75093 1534 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 RNF40O75150 1001 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 STX17P56962 302 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 WASHC4Q2M389 1173 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 MICALL1Q8N3F8 863 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 FAM71BQ8TC56 605 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 MED15Q96RN5 788 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 GEMIN8Q9NWZ8 242 aaKnown RBP15.92■□□□□ 0.14
VPS52-212ENST00000445902 LTN1O94822 1766 aa15.92■□□□□ 0.14
VPS52-212ENST00000445902 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 CTAGE9A4FU28 777 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 AKAP17AQ02040 695 aaKnown RBP15.91■□□□□ 0.14
VPS52-212ENST00000445902 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
VPS52-212ENST00000445902 KRT40Q6A162 431 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 OSBP2Q969R2 916 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 RFX7Q2KHR2 1363 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 CTAGE15A4D2H0 777 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 CTAGE8P0CG41 777 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 ANTXR2P58335 489 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 SLC9C2Q5TAH2 1124 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 CTAGE6Q86UF2 777 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 CTAGE4Q8IX94 777 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 JMYQ8N9B5 988 aa15.91■□□□□ 0.14
VPS52-212ENST00000445902 MKRN1Q9UHC7 482 aaKnown RBP15.91■□□□□ 0.14
VPS52-212ENST00000445902 COBLO75128 1261 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 RPS6KA5O75582 802 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 ZNF18P17022 549 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 IGSF22Q8N9C0 903 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 DEF6Q9H4E7 631 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 MARF1Q9Y4F3 1742 aaKnown RBP15.9■□□□□ 0.14
VPS52-212ENST00000445902 POTEB2H3BUK9 544 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
VPS52-212ENST00000445902 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 PPFIBP1Q86W92 1011 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 SEC31BQ9NQW1 1179 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 POLR2DO15514 142 aaKnown RBP15.9■□□□□ 0.14
VPS52-212ENST00000445902 RNF113AO15541 343 aaKnown RBP15.9■□□□□ 0.14
VPS52-212ENST00000445902 POSTNQ15063 836 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 TTC39AQ5SRH9 613 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 NKX2-3Q8TAU0 364 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 MAP3K14Q99558 947 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 SERTAD1Q9UHV2 236 aa15.9■□□□□ 0.14
VPS52-212ENST00000445902 TMEM2Q9UHN6 1383 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 ZMYND10O75800 440 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 IFIT1P09914 478 aaKnown RBP15.89■□□□□ 0.13
VPS52-212ENST00000445902 RALYLQ86SE5 291 aaKnown RBP15.89■□□□□ 0.13
VPS52-212ENST00000445902 HINFPQ9BQA5 517 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 A0A087WZG4 1122 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 PPP6R2O75170 966 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 CASP14P31944 242 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 NR1I3Q14994 352 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 IMMTQ16891 758 aaKnown RBP15.89■□□□□ 0.13
VPS52-212ENST00000445902 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 AFAP1L1Q8TED9 768 aa15.89■□□□□ 0.13
VPS52-212ENST00000445902 METTL22Q9BUU2 404 aaPredicted RBP15.89■□□□□ 0.13
VPS52-212ENST00000445902 FGAP02671 866 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 LIG3P49916 1009 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 MYL10Q9BUA6 226 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 BRMS1Q9HCU9 246 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 HOOK1Q9UJC3 728 aaKnown RBP15.88■□□□□ 0.13
VPS52-212ENST00000445902 NWD2Q9ULI1 1742 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 FOXP2O15409 715 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 PPFIA4O75335 1185 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.88■□□□□ 0.13
VPS52-212ENST00000445902 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
VPS52-212ENST00000445902 MB21D2Q8IYB1 491 aaPredicted RBP15.88■□□□□ 0.13
VPS52-212ENST00000445902 GSPT2Q8IYD1 628 aaKnown RBP15.88■□□□□ 0.13
VPS52-212ENST00000445902 IP6K1Q92551 441 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 MYCBPQ99417 103 aaPredicted RBP15.88■□□□□ 0.13
VPS52-212ENST00000445902 SENP2Q9HC62 589 aa15.88■□□□□ 0.13
VPS52-212ENST00000445902 CASP1P29466 404 aa15.87■□□□□ 0.13
VPS52-212ENST00000445902 MDM2Q00987 491 aaPredicted RBP15.87■□□□□ 0.13
VPS52-212ENST00000445902 ARHGEF25Q86VW2 580 aa15.87■□□□□ 0.13
VPS52-212ENST00000445902 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
VPS52-212ENST00000445902 NAPGQ99747 312 aaPredicted RBP15.87■□□□□ 0.13
VPS52-212ENST00000445902 NCAPGQ9BPX3 1015 aa15.87■□□□□ 0.13
VPS52-212ENST00000445902 TSPOAP1O95153 1857 aa15.87■□□□□ 0.13
VPS52-212ENST00000445902 MYO1BO43795 1136 aa15.87■□□□□ 0.13
VPS52-212ENST00000445902 SYF2O95926 243 aaKnown RBP15.87■□□□□ 0.13
VPS52-212ENST00000445902 TADA2BQ86TJ2 420 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms