RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TEKT1Q969V4 418 aa20.75■□□□□ 0.91
LIME1-202ENST00000444951 TNRC18O15417 2968 aaPredicted RBP20.74■□□□□ 0.91
LIME1-202ENST00000444951 TM4SF4P48230 202 aa20.74■□□□□ 0.91
LIME1-202ENST00000444951 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
LIME1-202ENST00000444951 SLF2Q8IX21 1173 aa20.74■□□□□ 0.91
LIME1-202ENST00000444951 MIGA1Q8NAN2 632 aa20.74■□□□□ 0.91
LIME1-202ENST00000444951 R3HDMLQ9H3Y0 253 aa20.74■□□□□ 0.91
LIME1-202ENST00000444951 DIAPH3Q9NSV4 1193 aa20.74■□□□□ 0.91
LIME1-202ENST00000444951 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.74■□□□□ 0.91
LIME1-202ENST00000444951 MYH7P12883 1935 aa20.73■□□□□ 0.91
LIME1-202ENST00000444951 LDHCP07864 332 aa20.73■□□□□ 0.91
LIME1-202ENST00000444951 ZFYP08048 801 aaPredicted RBP20.73■□□□□ 0.91
LIME1-202ENST00000444951 MLLT1Q03111 559 aaPredicted RBP20.73■□□□□ 0.91
LIME1-202ENST00000444951 CLMNQ96JQ2 1002 aa20.73■□□□□ 0.91
LIME1-202ENST00000444951 VEZTQ9HBM0 779 aa20.73■□□□□ 0.91
LIME1-202ENST00000444951 DAGLAQ9Y4D2 1042 aa20.73■□□□□ 0.91
LIME1-202ENST00000444951 MROH7-TTC4A0A0A0MT08 1334 aa20.73■□□□□ 0.91
LIME1-202ENST00000444951 TCRBV5S4A2TA0A5A2 114 aa20.72■□□□□ 0.91
LIME1-202ENST00000444951 NMIQ13287 307 aaPredicted RBP20.72■□□□□ 0.91
LIME1-202ENST00000444951 NBPF12Q5TAG4 269 aaPredicted RBP20.72■□□□□ 0.91
LIME1-202ENST00000444951 SPRYD7Q5W111 196 aa20.72■□□□□ 0.91
LIME1-202ENST00000444951 CTU1Q7Z7A3 348 aaKnown RBP20.72■□□□□ 0.91
LIME1-202ENST00000444951 ZNF296Q8WUU4 475 aaPredicted RBP20.72■□□□□ 0.91
LIME1-202ENST00000444951 FAM227BQ96M60 508 aa20.72■□□□□ 0.91
LIME1-202ENST00000444951 SEC62Q99442 399 aaKnown RBP20.72■□□□□ 0.91
LIME1-202ENST00000444951 NOL10Q9BSC4 688 aaKnown RBP20.72■□□□□ 0.91
LIME1-202ENST00000444951 SERPINA10Q9UK55 444 aa20.72■□□□□ 0.91
LIME1-202ENST00000444951 MYH2Q9UKX2 1941 aa20.72■□□□□ 0.91
LIME1-202ENST00000444951 BTDP43251 543 aa20.71■□□□□ 0.91
LIME1-202ENST00000444951 DYNLL1P63167 89 aaKnown RBP20.71■□□□□ 0.91
LIME1-202ENST00000444951 UBE3CQ15386 1083 aa20.71■□□□□ 0.91
LIME1-202ENST00000444951 MAP3K11Q16584 847 aa20.71■□□□□ 0.91
LIME1-202ENST00000444951 HHIPL2Q6UWX4 724 aa20.71■□□□□ 0.91
LIME1-202ENST00000444951 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
LIME1-202ENST00000444951 AATFQ9NY61 560 aaKnown RBP eCLIP20.71■□□□□ 0.91
LIME1-202ENST00000444951 OTOFQ9HC10 1997 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 A0A0D9SFI3 127 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 HIP1O00291 1037 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 CDC45O75419 566 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 CHMLP26374 656 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 SOX10P56693 466 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 HDLBPQ00341 1268 aaKnown RBP20.7■□□□□ 0.9
LIME1-202ENST00000444951 CDAN1Q8IWY9 1227 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 APPBP2Q92624 585 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 PPP2R3BQ9Y5P8 575 aa20.7■□□□□ 0.9
LIME1-202ENST00000444951 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 M0R2C6 588 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 RASA3Q14644 834 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 ZMYM1Q5SVZ6 1142 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 OSBP2Q969R2 916 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 ZDHHC15Q96MV8 337 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 PUS7LQ9H0K6 701 aaKnown RBP20.69■□□□□ 0.9
LIME1-202ENST00000444951 RFX7Q2KHR2 1363 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 LAMB1P07942 1786 aa20.69■□□□□ 0.9
LIME1-202ENST00000444951 GPR25O00155 361 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 MYO1BO43795 1136 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 MBD4O95243 580 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 BAG3O95817 575 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 GJA5P36382 358 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 SPDYE2Q495Y8 402 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 CASC1Q6TDU7 716 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 WNK4Q96J92 1243 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 MRIQ9BWK5 157 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
LIME1-202ENST00000444951 ARMT1Q9H993 441 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 USP40Q9NVE5 1235 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 ZNF70Q9UC06 446 aaPredicted RBP20.68■□□□□ 0.9
LIME1-202ENST00000444951 GAKO14976 1311 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 HTTP42858 3142 aa20.68■□□□□ 0.9
LIME1-202ENST00000444951 GPR75-ASB3A0A0A6YYF3 556 aa20.67■□□□□ 0.9
LIME1-202ENST00000444951 IGSF3O75054 1194 aa20.67■□□□□ 0.9
LIME1-202ENST00000444951 USP2O75604 605 aaPredicted RBP20.67■□□□□ 0.9
LIME1-202ENST00000444951 SREBF2Q12772 1141 aa20.67■□□□□ 0.9
LIME1-202ENST00000444951 APOBEC3HQ6NTF7 200 aaKnown RBP20.67■□□□□ 0.9
LIME1-202ENST00000444951 LCORLQ8N3X6 602 aa20.67■□□□□ 0.9
LIME1-202ENST00000444951 SH3RF3Q8TEJ3 882 aaPredicted RBP20.67■□□□□ 0.9
LIME1-202ENST00000444951 SLC10A4Q96EP9 437 aa20.67■□□□□ 0.9
LIME1-202ENST00000444951 FAM163AQ96GL9 167 aaPredicted RBP20.67■□□□□ 0.9
LIME1-202ENST00000444951 CACNB3P54284 484 aa20.66■□□□□ 0.9
LIME1-202ENST00000444951 CDC42EP5Q6NZY7 148 aa20.66■□□□□ 0.9
LIME1-202ENST00000444951 HELLSQ9NRZ9 838 aa20.66■□□□□ 0.9
LIME1-202ENST00000444951 HPS5Q9UPZ3 1129 aa20.66■□□□□ 0.9
LIME1-202ENST00000444951 IGF2BP3O00425 579 aaKnown RBP eCLIP20.65■□□□□ 0.9
LIME1-202ENST00000444951 PPP1R12BO60237 982 aaPredicted RBP20.65■□□□□ 0.9
LIME1-202ENST00000444951 SUPT20HL1Q3ZLR7 823 aa20.65■□□□□ 0.9
LIME1-202ENST00000444951 MCMDC2Q4G0Z9 681 aa20.65■□□□□ 0.9
LIME1-202ENST00000444951 TMED8Q6PL24 325 aaPredicted RBP20.65■□□□□ 0.9
LIME1-202ENST00000444951 RUFY2Q8WXA3 655 aa20.65■□□□□ 0.9
LIME1-202ENST00000444951 CFHR5Q9BXR6 569 aa20.65■□□□□ 0.9
LIME1-202ENST00000444951 GPAA1O43292 621 aa20.64■□□□□ 0.89
LIME1-202ENST00000444951 TICAM2Q86XR7 235 aa20.64■□□□□ 0.89
LIME1-202ENST00000444951 TEX11Q8IYF3 940 aa20.64■□□□□ 0.89
LIME1-202ENST00000444951 TEPSINQ96N21 525 aa20.64■□□□□ 0.89
LIME1-202ENST00000444951 RIOK1Q9BRS2 568 aaKnown RBP20.64■□□□□ 0.89
LIME1-202ENST00000444951 MANSC4A6NHS7 340 aaPredicted RBP20.63■□□□□ 0.89
LIME1-202ENST00000444951 TCP10L2B9ZVM9 353 aa20.63■□□□□ 0.89
LIME1-202ENST00000444951 PLCG2P16885 1265 aa20.63■□□□□ 0.89
LIME1-202ENST00000444951 PPP4CP60510 307 aa20.63■□□□□ 0.89
LIME1-202ENST00000444951 NOM1Q5C9Z4 860 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms