RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 AGAP3Q96P47 875 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 IWS1Q96ST2 819 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 SLC13A1Q9BZW2 595 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 MAPRE3Q9UPY8 281 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PA2G4Q9UQ80 394 aaKnown RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 EFR3BQ9Y2G0 817 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PCDHGA11Q9Y5H2 935 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 ERBB4Q15303 1308 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 GABRDO14764 452 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 INTS11Q5TA45 600 aaKnown RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 TBC1D1Q86TI0 1168 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 ACRBPQ8NEB7 543 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 IPCEF1Q8WWN9 437 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 VMP1Q96GC9 406 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 POLR3CQ9BUI4 534 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 YY1AP1Q9H869 796 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 PRDM11Q9NQV5 511 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 PDP2Q9P2J9 529 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 FAM198AQ9UFP1 575 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 TBK1Q9UHD2 729 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 ZNF180Q9UJW8 692 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 GOLGA6L6A8MZA4 724 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 M0R2N6 131 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 TPM2P07951 284 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 TM4SF4P48230 202 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 CHAF1AQ13111 956 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 TAF1CQ15572 869 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 FAM180BQ6P0A1 224 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 OSBPL7Q9BZF2 842 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 KIAA1586Q9HCI6 787 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 EYA2O00167 538 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 LGR5O75473 907 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 TPPPO94811 219 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 ATF7P17544 494 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 ALDH5A1P51649 535 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 HSP90B2PQ58FF3 399 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 SPATA1Q5VX52 437 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 CCDC102BQ68D86 513 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 HIBCHQ6NVY1 386 aaPredicted RBP4.68□□□□□ -1.66
UBR3-206ENST00000444475 FAM26EQ8N5C1 309 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 NAXEQ8NCW5 288 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 TAF4BQ92750 862 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 AP1M1Q9BXS5 423 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 NIF3L1Q9GZT8 377 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 KBTBD4Q9NVX7 518 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 TTLL3Q9Y4R7 772 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 ITIH6Q6UXX5 1313 aa4.68□□□□□ -1.66
UBR3-206ENST00000444475 BTF3P20290 206 aaKnown RBP4.67□□□□□ -1.66
UBR3-206ENST00000444475 SOX5P35711 763 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 PLA2G4AP47712 749 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 SNX16P57768 344 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 BRICD5Q6PL45 260 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 SH3RF1Q7Z6J0 888 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 TBC1D31Q96DN5 1066 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 SAP130Q9H0E3 1048 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 CCDC8Q9H0W5 538 aaPredicted RBP4.67□□□□□ -1.66
UBR3-206ENST00000444475 USP2O75604 605 aaPredicted RBP4.67□□□□□ -1.66
UBR3-206ENST00000444475 EIF4BP23588 611 aaKnown RBP4.67□□□□□ -1.66
UBR3-206ENST00000444475 MRE11P49959 708 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 USP46P62068 366 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 UBXN2AP68543 259 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 FAM26DQ5JW98 314 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 PERM1Q5SV97 790 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 USPL1Q5W0Q7 1092 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 C16orf87Q6PH81 154 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 CPLX2Q6PUV4 134 aaKnown RBP4.67□□□□□ -1.66
UBR3-206ENST00000444475 PASD1Q8IV76 773 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 IQCF2Q8IXL9 164 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 OR8H1Q8NGG4 311 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 CCDC34Q96HJ3 373 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 FNIP2Q9P278 1114 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 ARHGAP28Q9P2N2 729 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 RABL2BQ9UNT1 228 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 RAD54L2Q9Y4B4 1467 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 TNKSO95271 1327 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 MICAL2O94851 1124 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 ECEL1O95672 775 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 KCNA6P17658 529 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 CCT5P48643 541 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 MPP1Q00013 466 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 MAP3K10Q02779 954 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 STK3Q13188 491 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 COL9A2Q14055 689 aaPredicted RBP4.67□□□□□ -1.66
UBR3-206ENST00000444475 SAFBQ15424 915 aaKnown RBP eCLIP4.67□□□□□ -1.66
UBR3-206ENST00000444475 PCNX4Q63HM2 1172 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 NGEFQ8N5V2 710 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 UBR7Q8N806 425 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 RIN3Q8TB24 985 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 SEL1LQ9UBV2 794 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 GIMAP2Q9UG22 337 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 MAPK8IP1Q9UQF2 711 aa4.67□□□□□ -1.66
UBR3-206ENST00000444475 OPLAHO14841 1288 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 AREL1O15033 823 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 SMAD7O15105 426 aaKnown RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 TRIM37O94972 964 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 IFRD2Q12894 506 aaPredicted RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 BIRC3Q13489 604 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 LILRB1Q8NHL6 650 aaPredicted RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 ZBTB10Q96DT7 871 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 CSRNP1Q96S65 589 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms