RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 SCYL3Q8IZE3 742 aa17.58■□□□□ 0.4
LINC00642-202ENST00000442515 VGLL2Q8N8G2 317 aa17.58■□□□□ 0.4
LINC00642-202ENST00000442515 COA7Q96BR5 231 aa17.58■□□□□ 0.4
LINC00642-202ENST00000442515 KAZALD1Q96I82 304 aa17.58■□□□□ 0.4
LINC00642-202ENST00000442515 NBPF3Q9H094 633 aa17.58■□□□□ 0.4
LINC00642-202ENST00000442515 FAM198AQ9UFP1 575 aa17.58■□□□□ 0.4
LINC00642-202ENST00000442515 ALPK3Q96L96 1907 aa17.58■□□□□ 0.4
LINC00642-202ENST00000442515 PHF20L1A8MW92 1017 aa17.57■□□□□ 0.4
LINC00642-202ENST00000442515 PTPRAP18433 802 aa17.57■□□□□ 0.4
LINC00642-202ENST00000442515 DIXDC1Q155Q3 683 aa17.57■□□□□ 0.4
LINC00642-202ENST00000442515 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
LINC00642-202ENST00000442515 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
LINC00642-202ENST00000442515 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
LINC00642-202ENST00000442515 PICK1Q9NRD5 415 aa17.57■□□□□ 0.4
LINC00642-202ENST00000442515 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
LINC00642-202ENST00000442515 IL16Q14005 1332 aa17.56■□□□□ 0.4
LINC00642-202ENST00000442515 VAMP4O75379 141 aa17.56■□□□□ 0.4
LINC00642-202ENST00000442515 PDE8BO95263 885 aa17.56■□□□□ 0.4
LINC00642-202ENST00000442515 HMGCRP04035 888 aa17.56■□□□□ 0.4
LINC00642-202ENST00000442515 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
LINC00642-202ENST00000442515 RPTORQ8N122 1335 aa17.55■□□□□ 0.4
LINC00642-202ENST00000442515 MGAMO43451 1857 aa17.55■□□□□ 0.4
LINC00642-202ENST00000442515 ALDH1L1O75891 902 aa17.55■□□□□ 0.4
LINC00642-202ENST00000442515 FAM110CQ1W6H9 321 aa17.55■□□□□ 0.4
LINC00642-202ENST00000442515 ZFPM1Q8IX07 1006 aa17.55■□□□□ 0.4
LINC00642-202ENST00000442515 KIF16BQ96L93 1317 aa17.54■□□□□ 0.4
LINC00642-202ENST00000442515 TRIM75PA6NK02 468 aa17.54■□□□□ 0.4
LINC00642-202ENST00000442515 TRIM32Q13049 653 aa17.54■□□□□ 0.4
LINC00642-202ENST00000442515 WDR66Q8TBY9 1149 aa17.54■□□□□ 0.4
LINC00642-202ENST00000442515 GUCD1Q96NT3 240 aa17.54■□□□□ 0.4
LINC00642-202ENST00000442515 PFASO15067 1338 aa17.53■□□□□ 0.4
LINC00642-202ENST00000442515 IFIT1P09914 478 aaKnown RBP17.53■□□□□ 0.4
LINC00642-202ENST00000442515 NBPF7P0C2Y1 421 aaPredicted RBP17.53■□□□□ 0.4
LINC00642-202ENST00000442515 PRDX5P30044 214 aa17.53■□□□□ 0.4
LINC00642-202ENST00000442515 PUM3Q15397 648 aaKnown RBP17.53■□□□□ 0.4
LINC00642-202ENST00000442515 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
LINC00642-202ENST00000442515 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
LINC00642-202ENST00000442515 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
LINC00642-202ENST00000442515 HMX1Q9NP08 348 aaPredicted RBP17.53■□□□□ 0.4
LINC00642-202ENST00000442515 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
LINC00642-202ENST00000442515 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
LINC00642-202ENST00000442515 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
LINC00642-202ENST00000442515 FGFR2P21802 821 aa17.52■□□□□ 0.4
LINC00642-202ENST00000442515 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
LINC00642-202ENST00000442515 RABL6Q3YEC7 729 aaPredicted RBP17.52■□□□□ 0.4
LINC00642-202ENST00000442515 TREML2Q5T2D2 321 aa17.52■□□□□ 0.4
LINC00642-202ENST00000442515 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
LINC00642-202ENST00000442515 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.52■□□□□ 0.4
LINC00642-202ENST00000442515 OGDHLQ9ULD0 1010 aa17.52■□□□□ 0.4
LINC00642-202ENST00000442515 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.39
LINC00642-202ENST00000442515 SLURP2P0DP57 97 aa17.51■□□□□ 0.39
LINC00642-202ENST00000442515 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
LINC00642-202ENST00000442515 CCDC84Q86UT8 332 aaPredicted RBP17.51■□□□□ 0.39
LINC00642-202ENST00000442515 PNMA3Q9UL41 463 aa17.51■□□□□ 0.39
LINC00642-202ENST00000442515 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
LINC00642-202ENST00000442515 RGS3P49796 1198 aa17.5■□□□□ 0.39
LINC00642-202ENST00000442515 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
LINC00642-202ENST00000442515 GJD2Q9UKL4 321 aa17.5■□□□□ 0.39
LINC00642-202ENST00000442515 RFX7Q2KHR2 1363 aa17.5■□□□□ 0.39
LINC00642-202ENST00000442515 UTYO14607 1347 aa17.49■□□□□ 0.39
LINC00642-202ENST00000442515 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
LINC00642-202ENST00000442515 ENTPD3O75355 529 aa17.49■□□□□ 0.39
LINC00642-202ENST00000442515 MDM2Q00987 491 aaPredicted RBP17.49■□□□□ 0.39
LINC00642-202ENST00000442515 FAM109BQ6ICB4 259 aaPredicted RBP17.49■□□□□ 0.39
LINC00642-202ENST00000442515 SH3BP5LQ7L8J4 393 aa17.49■□□□□ 0.39
LINC00642-202ENST00000442515 TRIB2Q92519 343 aa17.49■□□□□ 0.39
LINC00642-202ENST00000442515 FAM161BQ96MY7 647 aa17.49■□□□□ 0.39
LINC00642-202ENST00000442515 IDI2Q9BXS1 227 aa17.49■□□□□ 0.39
LINC00642-202ENST00000442515 DDX60LQ5H9U9 1706 aaKnown RBP17.49■□□□□ 0.39
LINC00642-202ENST00000442515 COL2A1P02458 1487 aaPredicted RBP17.49■□□□□ 0.39
LINC00642-202ENST00000442515 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
LINC00642-202ENST00000442515 LDHBP07195 334 aaKnown RBP17.48■□□□□ 0.39
LINC00642-202ENST00000442515 SLC5A1P13866 664 aa17.48■□□□□ 0.39
LINC00642-202ENST00000442515 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
LINC00642-202ENST00000442515 MAP3K21Q5TCX8 1036 aa17.48■□□□□ 0.39
LINC00642-202ENST00000442515 ZSCAN29Q8IWY8 852 aaPredicted RBP17.48■□□□□ 0.39
LINC00642-202ENST00000442515 DDTLA6NHG4 134 aaPredicted RBP17.47■□□□□ 0.39
LINC00642-202ENST00000442515 COL6A1P12109 1028 aa17.47■□□□□ 0.39
LINC00642-202ENST00000442515 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
LINC00642-202ENST00000442515 GCLCP48506 637 aaPredicted RBP17.47■□□□□ 0.39
LINC00642-202ENST00000442515 PROCA1Q8NCQ7 364 aaPredicted RBP17.47■□□□□ 0.39
LINC00642-202ENST00000442515 LPIN2Q92539 896 aa17.47■□□□□ 0.39
LINC00642-202ENST00000442515 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
LINC00642-202ENST00000442515 PRDM6Q9NQX0 595 aa17.46■□□□□ 0.39
LINC00642-202ENST00000442515 DDX4Q9NQI0 724 aaKnown RBP17.45■□□□□ 0.38
LINC00642-202ENST00000442515 GAKO14976 1311 aa17.45■□□□□ 0.38
LINC00642-202ENST00000442515 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
LINC00642-202ENST00000442515 DOCK2Q92608 1830 aa17.44■□□□□ 0.38
LINC00642-202ENST00000442515 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
LINC00642-202ENST00000442515 CYP2B6P20813 491 aa17.44■□□□□ 0.38
LINC00642-202ENST00000442515 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
LINC00642-202ENST00000442515 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
LINC00642-202ENST00000442515 PTPRFP10586 1907 aa17.43■□□□□ 0.38
LINC00642-202ENST00000442515 EYA2O00167 538 aa17.43■□□□□ 0.38
LINC00642-202ENST00000442515 HMGCS2P54868 508 aa17.43■□□□□ 0.38
LINC00642-202ENST00000442515 SPP2Q13103 211 aa17.43■□□□□ 0.38
LINC00642-202ENST00000442515 PABPC4Q13310 644 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00642-202ENST00000442515 PICALMQ13492 652 aa17.43■□□□□ 0.38
LINC00642-202ENST00000442515 ASCC2Q9H1I8 757 aaPredicted RBP17.43■□□□□ 0.38
LINC00642-202ENST00000442515 DOCK1Q14185 1865 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms