RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ESRRAP11474 423 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 POU3F3P20264 500 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 TBC1D8BQ0IIM8 1120 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 DIEXFQ68CQ4 756 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 KRT26Q7Z3Y9 468 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 FMNL3Q8IVF7 1028 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 SYNPOQ8N3V7 929 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 RBSNQ9H1K0 784 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 DNAJB12Q9NXW2 375 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 ACRP10323 421 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 PTSQ03393 145 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZSCAN1Q8NBB4 408 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 EMILIN2Q9BXX0 1053 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 HOMER2Q9NSB8 354 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 GABBR1Q9UBS5 961 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 ATP8A1Q9Y2Q0 1164 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 THRAP3Q9Y2W1 955 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 CORINQ9Y5Q5 1042 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 H3BM21 787 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 H7C1W4 665 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 ADCY3O60266 1144 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 HTR3BO95264 441 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 CNGA1P29973 690 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 NEUROD1Q13562 356 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 TM4SF20Q53R12 229 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 TMEM67Q5HYA8 995 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 LCE2CQ5TA81 110 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 EEPD1Q7L9B9 569 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 THNSL2Q86YJ6 484 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZSWIM2Q8NEG5 633 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZNF669Q96BR6 464 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 UBE2OQ9C0C9 1292 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 LACRTQ9GZZ8 138 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 PCDHB10Q9UN67 800 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 LTBP3Q9NS15 1303 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 CCDC194A0A1B0GVG4 234 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 SLC35F4A4IF30 521 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 IRS4O14654 1257 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 CPB1P15086 417 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 CBX2Q14781 532 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 VHLLQ6RSH7 139 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 SLC16A10Q8TF71 515 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZC3H12CQ9C0D7 883 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 ATXN7L1Q9ULK2 861 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 TRIM33Q9UPN9 1127 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 RIPOR2Q9Y4F9 1068 aa5.55□□□□□ -1.52
CDC42BPA-207ENST00000441725 PRR36Q9H6K5 1346 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 GFRA2O00451 464 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 DNAJA2O60884 412 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 MYCLP1P12525 358 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 FGFR3P22607 806 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 LRRFIP1Q32MZ4 808 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 HGSNATQ68CP4 663 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 SYT9Q86SS6 491 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 NIM1KQ8IY84 436 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 TRIM22Q8IYM9 498 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 NINJ1Q92982 152 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 MFSD3Q96ES6 412 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 SPATA9Q9BWV2 254 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 SH2B1Q9NRF2 756 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 CACNA2D2Q9NY47 1150 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 PRR12Q9ULL5 1215 aa5.54□□□□□ -1.52
CDC42BPA-207ENST00000441725 FAM86C2PA6NEL3 165 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 KCNQ2O43526 872 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 GSTP1P09211 210 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 PTPRAP18433 802 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 STAT3P40763 770 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 INPP5AQ14642 412 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 SLC10A6Q3KNW5 377 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 WIPI1Q5MNZ9 446 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 FAM182BQ5T319 152 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 UNC5AQ6ZN44 842 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 RAVER1Q8IY67 606 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 GTPBP3Q969Y2 492 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZNF837Q96EG3 531 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 SGSM3Q96HU1 749 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 ADAM19Q9H013 955 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 REV1Q9UBZ9 1251 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 NAGPAQ9UK23 515 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 A0A087X0B3 334 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 PEX14O75381 377 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 EPHA1P21709 976 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 CTBSQ01459 385 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 IKBKEQ14164 716 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 BRDTQ58F21 947 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 PERM1Q5SV97 790 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 SCARA3Q6AZY7 606 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 TMED8Q6PL24 325 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 TAB3Q8N5C8 712 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZBTB38Q8NAP3 1195 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 GPBAR1Q8TDU6 330 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 PLPPR2Q96GM1 343 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 PCDHA4Q9UN74 947 aa5.53□□□□□ -1.52
CDC42BPA-207ENST00000441725 LOC102724159A0A0B4J2E5 919 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 SOX1O00570 391 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 SUSD5O60279 629 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 PPFIA3O75145 1194 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms