RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 NPM3O75607 178 aaKnown RBP25.08■■□□□ 1.61
VPS13B-204ENST00000441350 HAND2P61296 217 aa25.08■■□□□ 1.61
VPS13B-204ENST00000441350 DPY19L2Q6NUT2 758 aa25.08■■□□□ 1.61
VPS13B-204ENST00000441350 DDX4Q9NQI0 724 aaKnown RBP25.08■■□□□ 1.61
VPS13B-204ENST00000441350 H7C1D1 291 aa25.08■■□□□ 1.6
VPS13B-204ENST00000441350 EGFRP00533 1210 aa25.08■■□□□ 1.6
VPS13B-204ENST00000441350 NFIAQ12857 509 aa25.08■■□□□ 1.6
VPS13B-204ENST00000441350 SPDYE2Q495Y8 402 aa25.08■■□□□ 1.6
VPS13B-204ENST00000441350 MCM9Q9NXL9 1143 aa25.08■■□□□ 1.6
VPS13B-204ENST00000441350 ARPP21Q9UBL0 812 aaPredicted RBP25.08■■□□□ 1.6
VPS13B-204ENST00000441350 ANAPC4Q9UJX5 808 aa25.08■■□□□ 1.6
VPS13B-204ENST00000441350 NBPF9Q3BBW0 867 aa25.07■■□□□ 1.6
VPS13B-204ENST00000441350 ADCK5Q3MIX3 580 aa25.07■■□□□ 1.6
VPS13B-204ENST00000441350 SAMD7Q7Z3H4 446 aa25.07■■□□□ 1.6
VPS13B-204ENST00000441350 ZNF70Q9UC06 446 aaPredicted RBP25.07■■□□□ 1.6
VPS13B-204ENST00000441350 MYH1P12882 1939 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 LAMB1P07942 1786 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 CYP2D7A0A087X1C5 515 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 CACNB3P54284 484 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 PPARAQ07869 468 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 KRT32Q14532 448 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 STOX1Q6ZVD7 989 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 L3MBTL3Q96JM7 780 aaPredicted RBP25.06■■□□□ 1.6
VPS13B-204ENST00000441350 FAM198AQ9UFP1 575 aa25.06■■□□□ 1.6
VPS13B-204ENST00000441350 GLTPD2A6NH11 291 aa25.05■■□□□ 1.6
VPS13B-204ENST00000441350 MINDY4BA8MYZ0 360 aa25.05■■□□□ 1.6
VPS13B-204ENST00000441350 EPS15P42566 896 aa25.05■■□□□ 1.6
VPS13B-204ENST00000441350 PICALMQ13492 652 aa25.05■■□□□ 1.6
VPS13B-204ENST00000441350 C12orf60Q5U649 245 aa25.05■■□□□ 1.6
VPS13B-204ENST00000441350 TBC1D10CQ8IV04 446 aa25.05■■□□□ 1.6
VPS13B-204ENST00000441350 TM6SF1Q9BZW5 370 aa25.05■■□□□ 1.6
VPS13B-204ENST00000441350 DCAF8L1A6NGE4 600 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 E7EWF7 191 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 CYP2D6P10635 497 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 RABEP1Q15276 862 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 KIF4BQ2VIQ3 1234 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 TBC1D10BQ4KMP7 808 aaPredicted RBP25.04■■□□□ 1.6
VPS13B-204ENST00000441350 RBM26Q5T8P6 1007 aaKnown RBP25.04■■□□□ 1.6
VPS13B-204ENST00000441350 FKBP1CQ5VVH2 108 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 OSBPL5Q9H0X9 879 aaPredicted RBP25.04■■□□□ 1.6
VPS13B-204ENST00000441350 SAP30BPQ9UHR5 308 aaKnown RBP25.04■■□□□ 1.6
VPS13B-204ENST00000441350 CLRN2A0PK11 232 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 SMIM22K7EJ46 135 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 MYO1BO43795 1136 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 JAKMIP1Q96N16 626 aaKnown RBP25.04■■□□□ 1.6
VPS13B-204ENST00000441350 TMOD2Q9NZR1 351 aa25.04■■□□□ 1.6
VPS13B-204ENST00000441350 ENTPD3O75355 529 aa25.03■■□□□ 1.6
VPS13B-204ENST00000441350 EVX2Q03828 476 aa25.03■■□□□ 1.6
VPS13B-204ENST00000441350 CTDSPL2Q05D32 466 aa25.03■■□□□ 1.6
VPS13B-204ENST00000441350 LMOD1P29536 600 aaPredicted RBP25.02■■□□□ 1.6
VPS13B-204ENST00000441350 ZFPM1Q8IX07 1006 aa25.02■■□□□ 1.6
VPS13B-204ENST00000441350 ZSWIM6Q9HCJ5 1215 aa25.02■■□□□ 1.6
VPS13B-204ENST00000441350 TACC3Q9Y6A5 838 aa25.02■■□□□ 1.6
VPS13B-204ENST00000441350 POLR3DP05423 398 aaPredicted RBP25.01■■□□□ 1.59
VPS13B-204ENST00000441350 PSMA5P28066 241 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 AKNAD1Q5T1N1 836 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 AMOTL1Q8IY63 956 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 TRPM4Q8TD43 1214 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 STAG1Q8WVM7 1258 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 NEK1Q96PY6 1258 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 ROBO3Q96MS0 1386 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 COL2A1P02458 1487 aaPredicted RBP25.01■■□□□ 1.59
VPS13B-204ENST00000441350 FGRP09769 529 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 PLCD1P51178 756 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 TCP10Q12799 353 aa25.01■■□□□ 1.59
VPS13B-204ENST00000441350 COL9A3Q14050 684 aaPredicted RBP25.01■■□□□ 1.59
VPS13B-204ENST00000441350 ADARB2Q9NS39 739 aaKnown RBP25.01■■□□□ 1.59
VPS13B-204ENST00000441350 CASTP20810 708 aaKnown RBP25■■□□□ 1.59
VPS13B-204ENST00000441350 CNTNAP1P78357 1384 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 ATRNL1Q5VV63 1379 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 TCP10L2B9ZVM9 353 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 PCP11498 1178 aaKnown RBP24.99■■□□□ 1.59
VPS13B-204ENST00000441350 HIRAP54198 1017 aaPredicted RBP24.99■■□□□ 1.59
VPS13B-204ENST00000441350 SLC4A8Q2Y0W8 1093 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 MFSD6Q6ZSS7 791 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 TTC6Q86TZ1 520 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 FAM83AQ86UY5 434 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 UPF3BQ9BZI7 483 aaKnown RBP24.99■■□□□ 1.59
VPS13B-204ENST00000441350 DHX36Q9H2U1 1008 aaKnown RBP24.99■■□□□ 1.59
VPS13B-204ENST00000441350 RNF41Q9H4P4 317 aaPredicted RBP24.99■■□□□ 1.59
VPS13B-204ENST00000441350 VEZTQ9HBM0 779 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 INCENPQ9NQS7 918 aa24.99■■□□□ 1.59
VPS13B-204ENST00000441350 RUFY3Q7L099 469 aa24.98■■□□□ 1.59
VPS13B-204ENST00000441350 SH3BP5LQ7L8J4 393 aa24.98■■□□□ 1.59
VPS13B-204ENST00000441350 IL27Q8NEV9 243 aa24.98■■□□□ 1.59
VPS13B-204ENST00000441350 WDR90Q96KV7 1748 aa24.98■■□□□ 1.59
VPS13B-204ENST00000441350 ASTN2O75129 1339 aaPredicted RBP24.98■■□□□ 1.59
VPS13B-204ENST00000441350 NEDD4P46934 1319 aa24.98■■□□□ 1.59
VPS13B-204ENST00000441350 SLC3A2P08195 630 aaKnown RBP24.97■■□□□ 1.59
VPS13B-204ENST00000441350 HMGB1P09429 215 aaKnown RBP24.97■■□□□ 1.59
VPS13B-204ENST00000441350 NEK4P51957 841 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 BLOC1S2Q6QNY1 142 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 NCOA7Q8NI08 942 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 FAM151AQ8WW52 585 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 HACL1Q9UJ83 578 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.97■■□□□ 1.59
VPS13B-204ENST00000441350 CYP46A1Q9Y6A2 500 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 SCN4AP35499 1836 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 DDTLA6NHG4 134 aaPredicted RBP24.97■■□□□ 1.59
VPS13B-204ENST00000441350 CPA1P15085 419 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms