RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TMEM232C9JQI7 657 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 GSDMDP57764 484 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 NR5A1Q13285 461 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 ZNF827Q17R98 1081 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 SMAP1Q8IYB5 467 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 GRAMD1CQ8IYS0 662 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 LCORLQ8N3X6 602 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 LPIN2Q92539 896 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 OSBPL5Q9H0X9 879 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 FANCLQ9NW38 375 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 PCDHA5Q9Y5H7 936 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 PATL2C9JE40 543 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 UBASH3AP57075 661 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 TPM4P67936 248 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 SSRP1Q08945 709 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 ELF2Q15723 593 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 METTL16Q86W50 562 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 LRRN4CLQ8ND94 238 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 CDHR2Q9BYE9 1310 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 ABCC6O95255 1503 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 KIF18AQ8NI77 898 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 PPP1R13BQ96KQ4 1090 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 PRDM4Q9UKN5 801 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 SLC4A4Q9Y6R1 1079 aa15.63■□□□□ 0.09
HERPUD1-204ENST00000439977 GSG1L2A8MUP6 293 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 PDE4BQ07343 736 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 MAP3K12Q12852 859 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 MFSD6Q6ZSS7 791 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 FAM177A1Q8N128 213 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 TMEM87BQ96K49 555 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 MINDY4BA8MYZ0 360 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 ARID4AP29374 1257 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 HOMER1Q86YM7 354 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 DIS3L2Q8IYB7 885 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 SDR42E1Q8WUS8 393 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 ABCF2Q9UG63 623 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 HPSEQ9Y251 543 aa15.62■□□□□ 0.09
HERPUD1-204ENST00000439977 BMP6P22004 513 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 OXER1Q8TDS5 423 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 ACSBG1Q96GR2 724 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 TMX1Q9H3N1 280 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 LRP2BPQ9P2M1 347 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 UQCRFS1P1P0C7P4 283 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 TOB1P50616 345 aaPredicted RBP15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 AKNAD1Q5T1N1 836 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 TRMT44Q8IYL2 757 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 BPIFA3Q9BQP9 254 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 PPP6R2O75170 966 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 SLC5A1P13866 664 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 RESP18Q5W5W9 173 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 USP49Q70CQ1 688 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 NOSTRINQ8IVI9 506 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 IMPACTQ9P2X3 320 aa15.61■□□□□ 0.09
HERPUD1-204ENST00000439977 WDR19Q8NEZ3 1342 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 POLR2DO15514 142 aaKnown RBP15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 FGFR2P21802 821 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 MYL5Q02045 173 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 UTP14AQ9BVJ6 771 aaKnown RBP15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 TUBE1Q9UJT0 475 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 PCDHB6Q9Y5E3 794 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 PRR29P0C7W0 189 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 KMT5BQ4FZB7 885 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 KRBA2Q6ZNG9 492 aa15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 ZNF512BQ96KM6 892 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-204ENST00000439977 UBR2Q8IWV8 1755 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 SGMS1Q86VZ5 419 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 ABCC12Q96J65 1359 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 CYP2D7A0A087X1C5 515 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 FAM205CA6NFA0 338 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 WTAPQ15007 396 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 RTN1Q16799 776 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 ERCC6LQ2NKX8 1250 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 OLFM4Q6UX06 510 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 ADGRA1Q86SQ6 560 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 KRI1Q8N9T8 703 aaKnown RBP15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 CCDC150Q8NCX0 1101 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 CABP5Q9NP86 173 aa15.59■□□□□ 0.09
HERPUD1-204ENST00000439977 PRDM1O75626 825 aa15.58■□□□□ 0.09
HERPUD1-204ENST00000439977 SERTAD1Q9UHV2 236 aa15.58■□□□□ 0.09
HERPUD1-204ENST00000439977 DNAI1Q9UI46 699 aa15.58■□□□□ 0.09
HERPUD1-204ENST00000439977 MYH15Q9Y2K3 1946 aa15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 EXOC5O00471 708 aa15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 FMNL1O95466 1100 aaPredicted RBP15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 CASP1P29466 404 aa15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 SAFBQ15424 915 aaKnown RBP eCLIP15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 FBXO38Q6PIJ6 1188 aa15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 ZNF34Q8IZ26 560 aa15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 MROH5Q6ZUA9 1318 aa15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 PARP4Q9UKK3 1724 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-204ENST00000439977 IKBKBO14920 756 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 CUTAO60888 179 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 MMP1P03956 469 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 LIFRP42702 1097 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 TIGD1Q96MW7 591 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 CGNQ9P2M7 1197 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 SPEF2Q9C093 1822 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms