RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 OFD1O75665 1012 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-218ENST00000439806 CDC27P30260 824 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
CPNE1-218ENST00000439806 RTN1Q16799 776 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 ANO1Q5XXA6 986 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 KRT40Q6A162 431 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 FNBP4Q8N3X1 1017 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-218ENST00000439806 NKX2-3Q8TAU0 364 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 SENP2Q9HC62 589 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 INCENPQ9NQS7 918 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-218ENST00000439806 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 COL1A1P02452 1464 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-218ENST00000439806 DUOX1Q9NRD9 1551 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 TNRC6CQ9HCJ0 1690 aaKnown RBP12.11□□□□□ -0.47
CPNE1-218ENST00000439806 NID2Q14112 1375 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 MINDY4BA8MYZ0 360 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 KIF28PB7ZC32 967 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 MEX3CQ5U5Q3 659 aaKnown RBP12.11□□□□□ -0.47
CPNE1-218ENST00000439806 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 LUZP1Q86V48 1076 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 TRIM22Q8IYM9 498 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 TMTC2Q8N394 836 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 LINC00301Q8NCQ3 95 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
CPNE1-218ENST00000439806 PHKBQ93100 1093 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 UBAC1Q9BSL1 405 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 SLC26A6Q9BXS9 759 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 DNAJC25Q9H1X3 360 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
CPNE1-218ENST00000439806 GOLGA6L19H0YKK7 550 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-218ENST00000439806 ZNF165P49910 485 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 FBXO33Q7Z6M2 555 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 ENGASEQ8NFI3 743 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 SDR42E1Q8WUS8 393 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 ESR2Q92731 530 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 FAM84BQ96KN1 310 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-218ENST00000439806 AIFM3Q96NN9 605 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 ZKSCAN3Q9BRR0 538 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 GJB4Q9NTQ9 266 aa12.1□□□□□ -0.47
CPNE1-218ENST00000439806 PDS5AQ29RF7 1337 aaKnown RBP12.1□□□□□ -0.47
CPNE1-218ENST00000439806 CCDC196A0A1B0GTZ2 297 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
CPNE1-218ENST00000439806 HIBADHP31937 336 aaKnown RBP12.09□□□□□ -0.47
CPNE1-218ENST00000439806 RCAN1P53805 252 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
CPNE1-218ENST00000439806 CHAF1AQ13111 956 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-218ENST00000439806 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.471e-17■■■■□ 20.2
CPNE1-218ENST00000439806 ZRSR1Q15695 479 aaKnown RBP12.09□□□□□ -0.47
CPNE1-218ENST00000439806 NTRK3Q16288 839 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 ADGRA1Q86SQ6 560 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 MPNDQ8N594 471 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 JMYQ8N9B5 988 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 ANO10Q9NW15 660 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 ANAPC4Q9UJX5 808 aa12.09□□□□□ -0.47
CPNE1-218ENST00000439806 A0A1B0GVL5 298 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 AP5Z1O43299 807 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 IFNAR1P17181 557 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 RFC4P35249 363 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 SNW1Q13573 536 aaKnown RBP12.08□□□□□ -0.48
CPNE1-218ENST00000439806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-218ENST00000439806 DRC7Q8IY82 874 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 ZNF654Q8IZM8 581 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 FMR1NBQ8N0W7 255 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-218ENST00000439806 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 SPC24Q8NBT2 197 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 NUP133Q8WUM0 1156 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
CPNE1-218ENST00000439806 SDF4Q9BRK5 362 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
CPNE1-218ENST00000439806 TRIM5Q9C035 493 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-218ENST00000439806 TFCP2L1Q9NZI6 479 aa12.08□□□□□ -0.48
CPNE1-218ENST00000439806 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-218ENST00000439806 BECN2A8MW95 431 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 PPP6R2O75170 966 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 DEXIO95424 95 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 TPM2P07951 284 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
CPNE1-218ENST00000439806 ZNF75DP51815 510 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
CPNE1-218ENST00000439806 SLC39A14Q15043 492 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 FAM182BQ5T319 152 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-218ENST00000439806 C11orf57Q6ZUT1 292 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-218ENST00000439806 NAV1Q8NEY1 1877 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-218ENST00000439806 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms