RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 WDHD1O75717 1129 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-216ENST00000439475 RHBDL3P58872 404 aa12.72□□□□□ -0.37
MCF2L-216ENST00000439475 VGLL4Q14135 290 aa12.72□□□□□ -0.37
MCF2L-216ENST00000439475 ERO1BQ86YB8 467 aa12.72□□□□□ -0.37
MCF2L-216ENST00000439475 GPATCH3Q96I76 525 aa12.72□□□□□ -0.37
MCF2L-216ENST00000439475 PIH1D3Q9NQM4 214 aaKnown RBP12.72□□□□□ -0.37
MCF2L-216ENST00000439475 AATFQ9NY61 560 aaKnown RBP eCLIP12.72□□□□□ -0.37
MCF2L-216ENST00000439475 ATP5JP18859 108 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 GTF2A2P52657 109 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 ZFPM1Q8IX07 1006 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 ZNF384Q8TF68 577 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.37
MCF2L-216ENST00000439475 DHX36Q9H2U1 1008 aaKnown RBP12.71□□□□□ -0.37
MCF2L-216ENST00000439475 BOLA2Q9H3K6 86 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 ANTXR1Q9H6X2 564 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 ZNF112Q9UJU3 913 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
MCF2L-216ENST00000439475 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
MCF2L-216ENST00000439475 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-216ENST00000439475 TBC1D12O60347 775 aa12.7□□□□□ -0.38
MCF2L-216ENST00000439475 PPATQ06203 517 aa12.7□□□□□ -0.38
MCF2L-216ENST00000439475 SH3RF3Q8TEJ3 882 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-216ENST00000439475 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-216ENST00000439475 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
MCF2L-216ENST00000439475 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.7□□□□□ -0.38
MCF2L-216ENST00000439475 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-216ENST00000439475 CEP350Q5VT06 3117 aa12.7□□□□□ -0.38
MCF2L-216ENST00000439475 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-216ENST00000439475 DDTLA6NHG4 134 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-216ENST00000439475 GOLIM4O00461 696 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 USP5P45974 858 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 MAP3K10Q02779 954 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 SLC9C2Q5TAH2 1124 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 ZSCAN25Q6NSZ9 544 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 FOXP4Q8IVH2 680 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-216ENST00000439475 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 HAUS7Q99871 368 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 TRIM34Q9BYJ4 488 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.383e-6■■□□□ 12.6
MCF2L-216ENST00000439475 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
MCF2L-216ENST00000439475 PICK1Q9NRD5 415 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 PAG1Q9NWQ8 432 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 PI4KBQ9UBF8 816 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
MCF2L-216ENST00000439475 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
MCF2L-216ENST00000439475 TBC1D8O95759 1140 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 HLA-DOAP06340 250 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 CETPP11597 493 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 INPP5BP32019 993 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 PPIL2Q13356 520 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 SNAPC2Q13487 334 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 CCL15Q16663 113 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 NOL9Q5SY16 702 aaKnown RBP12.68□□□□□ -0.38
MCF2L-216ENST00000439475 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
MCF2L-216ENST00000439475 SUPT16HQ9Y5B9 1047 aaKnown RBP12.68□□□□□ -0.38
MCF2L-216ENST00000439475 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 RFX7Q2KHR2 1363 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 ATRNL1Q5VV63 1379 aa12.68□□□□□ -0.38
MCF2L-216ENST00000439475 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
MCF2L-216ENST00000439475 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 MAGEB6P1A0A0J9YX57 407 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 ERC2O15083 957 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 GJA5P36382 358 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 DYNLL1P63167 89 aaKnown RBP12.67□□□□□ -0.38
MCF2L-216ENST00000439475 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
MCF2L-216ENST00000439475 NOM1Q5C9Z4 860 aaKnown RBP12.67□□□□□ -0.38
MCF2L-216ENST00000439475 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 MIGA1Q8NAN2 632 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
MCF2L-216ENST00000439475 RWDD1Q9H446 243 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-216ENST00000439475 MAST2Q6P0Q8 1798 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 GPR25O00155 361 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 CXCL11O14625 94 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 IRF6O14896 467 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 HDAC1Q13547 482 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-216ENST00000439475 ANKRD45Q5TZF3 282 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 ADGRA1Q86SQ6 560 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 CRACR2BQ8N4Y2 399 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-216ENST00000439475 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
MCF2L-216ENST00000439475 ZFYVE28Q9HCC9 887 aa12.66□□□□□ -0.38
MCF2L-216ENST00000439475 ZCCHC17Q9NP64 241 aaKnown RBP12.66□□□□□ -0.38
MCF2L-216ENST00000439475 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-216ENST00000439475 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 ZNF532Q9HCE3 1301 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 DOCK2Q92608 1830 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 PHF20L1A8MW92 1017 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 FKTNO75072 461 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 PDE6AP16499 860 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms