RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 OTUD7BQ6GQQ9 843 aa5.57□□□□□ -1.52
LINC01239-202ENST00000436786 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.57□□□□□ -1.52
LINC01239-202ENST00000436786 KLHDC4Q8TBB5 520 aa5.57□□□□□ -1.52
LINC01239-202ENST00000436786 CD99L2Q8TCZ2 262 aa5.57□□□□□ -1.52
LINC01239-202ENST00000436786 TMEM39BQ9GZU3 492 aa5.57□□□□□ -1.52
LINC01239-202ENST00000436786 BICC1Q9H694 974 aaKnown RBP5.57□□□□□ -1.52
LINC01239-202ENST00000436786 CACNB3P54284 484 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 MAP3K9P80192 1104 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 FOXK1P85037 733 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 CAP1Q01518 475 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 RABL6Q3YEC7 729 aaPredicted RBP5.56□□□□□ -1.52
LINC01239-202ENST00000436786 METTL24Q5JXM2 366 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 VPS37DQ86XT2 251 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 VGLL2Q8N8G2 317 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 ERO1AQ96HE7 468 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 PTPN22Q9Y2R2 807 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 ZNF521Q96K83 1311 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 FRAT2O75474 233 aaPredicted RBP5.56□□□□□ -1.52
LINC01239-202ENST00000436786 PDE8BO95263 885 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 TNNI2P48788 182 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 FOSBP53539 338 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 SP3Q02447 781 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 VGLL4Q14135 290 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 CAVIN4Q5BKX8 364 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 PLPP6Q8IY26 295 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 BRI3BPQ8WY22 251 aa5.56□□□□□ -1.52
LINC01239-202ENST00000436786 ECM29Q5VYK3 1845 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 CACNA1FO60840 1977 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 CCL15-CCL14A0A0B4J2E2 113 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 GTF2A2P52657 109 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 HDLBPQ00341 1268 aaKnown RBP5.55□□□□□ -1.52
LINC01239-202ENST00000436786 CCL15Q16663 113 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 INTS3Q68E01 1043 aaKnown RBP5.55□□□□□ -1.52
LINC01239-202ENST00000436786 FAM43AQ8N2R8 423 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC01239-202ENST00000436786 TBC1D22AQ8WUA7 517 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 TEKT1Q969V4 418 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 USP44Q9H0E7 712 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 EFCC1Q9HA90 598 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 CSADQ9Y600 493 aa5.55□□□□□ -1.52
LINC01239-202ENST00000436786 APOBEC3HQ6NTF7 200 aaKnown RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 SSH1Q8WYL5 1049 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 ARMC5Q96C12 935 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 ZDHHC15Q96MV8 337 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 MRIQ9BWK5 157 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 SNCAIPQ9Y6H5 919 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 PTPRCP08575 1304 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 SPDYE5A6NIY4 337 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 PPP1R3GB7ZBB8 358 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 IFIT1P09914 478 aaKnown RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 EN2P19622 333 aaPredicted RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 FGFR2P21802 821 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 RFX5P48382 616 aaPredicted RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 PUM3Q15397 648 aaKnown RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 TAF1CQ15572 869 aaPredicted RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 PPP1R18Q6NYC8 613 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 ZKSCAN4Q969J2 545 aaPredicted RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 ZFRQ96KR1 1074 aaKnown RBP5.54□□□□□ -1.52
LINC01239-202ENST00000436786 ZFYVE28Q9HCC9 887 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 LAMB1P07942 1786 aa5.54□□□□□ -1.52
LINC01239-202ENST00000436786 OTOFQ9HC10 1997 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 EYA2O00167 538 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 ZEB1P37275 1124 aaPredicted RBP5.53□□□□□ -1.52
LINC01239-202ENST00000436786 HHIPL2Q6UWX4 724 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 MIGA2Q7L4E1 593 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 FAM83AQ86UY5 434 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 ZDHHC16Q969W1 377 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 WRNIP1Q96S55 665 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 IL21Q9HBE4 155 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 TMOD2Q9NZR1 351 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 ARAP2Q8WZ64 1704 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 BTBD19C9JJ37 291 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 E9PSI1 815 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 IRF6O14896 467 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 CETPP11597 493 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 ARHGEF6Q15052 776 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 FKBP1CQ5VVH2 108 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 ATG9AQ7Z3C6 839 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 ERO1BQ86YB8 467 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 ARHGAP39Q9C0H5 1083 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.53□□□□□ -1.52
LINC01239-202ENST00000436786 SUGT1Q9Y2Z0 365 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 PTCH2Q9Y6C5 1203 aa5.53□□□□□ -1.52
LINC01239-202ENST00000436786 MAST3O60307 1309 aa5.52□□□□□ -1.52
LINC01239-202ENST00000436786 KIF16BQ96L93 1317 aa5.52□□□□□ -1.52
LINC01239-202ENST00000436786 TLR2O60603 784 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 MYCP01106 439 aaPredicted RBP5.52□□□□□ -1.53
LINC01239-202ENST00000436786 SLC5A1P13866 664 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 INPP5BP32019 993 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 SLFN5Q08AF3 891 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 TCP10Q12799 353 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 PPIL2Q13356 520 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 DIXDC1Q155Q3 683 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 SLC9C1Q4G0N8 1177 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 DCAF15Q66K64 600 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 CDC42EP5Q6NZY7 148 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 WDR66Q8TBY9 1149 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 LPIN2Q92539 896 aa5.52□□□□□ -1.53
LINC01239-202ENST00000436786 HOOK2Q96ED9 719 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms