RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 GSG1L2A8MUP6 293 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 MAP3K14Q99558 947 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 GOLGA8AA7E2F4 631 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 SPECC1Q5M775 1068 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 MIGA1Q8NAN2 632 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 NAPBQ9H115 298 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 HSD3B7Q9H2F3 369 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 UQCRFS1P1P0C7P4 283 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 ATP1A3P13637 1013 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 SLC26A6Q9BXS9 759 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 NAT10Q9H0A0 1025 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 EXOC5O00471 708 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 IFIT3O14879 490 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 PNOCQ13519 176 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 INTS5Q6P9B9 1019 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 SGMS1Q86VZ5 419 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 COL4A1P02462 1669 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 MROH5Q6ZUA9 1318 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 SMC2O95347 1197 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 SYKP43405 635 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 EIF5P55010 431 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 NLRP12P59046 1061 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 ACSBG1Q96GR2 724 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 TMEM87BQ96K49 555 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 HPSEQ9Y251 543 aa12.03□□□□□ -0.48
CLSTN1-203ENST00000435891 ECM29Q5VYK3 1845 aa12.02□□□□□ -0.48
CLSTN1-203ENST00000435891 GRIN1Q05586 938 aa12.02□□□□□ -0.48
CLSTN1-203ENST00000435891 NCBP1Q09161 790 aaKnown RBP12.02□□□□□ -0.48
CLSTN1-203ENST00000435891 FOXP4Q8IVH2 680 aaPredicted RBP12.02□□□□□ -0.48
CLSTN1-203ENST00000435891 MPHOSPH8Q99549 860 aa12.02□□□□□ -0.48
CLSTN1-203ENST00000435891 KCNJ14Q9UNX9 436 aa12.02□□□□□ -0.48
CLSTN1-203ENST00000435891 FOXN1O15353 648 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 ARMCX5Q6P1M9 558 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 ADGRA1Q86SQ6 560 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 ANKRD7Q92527 254 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 BTBD18B2RXH4 712 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 SLC5A1P13866 664 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 MAP3K12Q12852 859 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 ZRSR1Q15695 479 aaKnown RBP12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 ALX1Q15699 326 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 SLC12A7Q9Y666 1083 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 LRP5O75197 1615 aa12.02□□□□□ -0.49
CLSTN1-203ENST00000435891 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 AKNAD1Q5T1N1 836 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 CEP135Q66GS9 1140 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 CDKL5O76039 1030 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 NYAP1Q6ZVC0 841 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 NHSL1Q5SYE7 1610 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 LIFRP42702 1097 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 TOB1P50616 345 aaPredicted RBP12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 METTL16Q86W50 562 aaKnown RBP12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 DPF2Q92785 391 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 BPIFA3Q9BQP9 254 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 SLC4A4Q9Y6R1 1079 aa12.01□□□□□ -0.49
CLSTN1-203ENST00000435891 CPLX2Q6PUV4 134 aaKnown RBP12□□□□□ -0.49
CLSTN1-203ENST00000435891 CCAR2Q8N163 923 aaKnown RBP12□□□□□ -0.49
CLSTN1-203ENST00000435891 SDR42E1Q8WUS8 393 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 OSBPL5Q9H0X9 879 aaPredicted RBP12□□□□□ -0.49
CLSTN1-203ENST00000435891 PPP6R2O75170 966 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 TDO2P48775 406 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 ITPK1Q13572 414 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 MFSD6Q6ZSS7 791 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 TUBE1Q9UJT0 475 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 CAMTA2O94983 1202 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 BMP6P22004 513 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 NR5A1Q13285 461 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 RESP18Q5W5W9 173 aa12□□□□□ -0.49
CLSTN1-203ENST00000435891 E4F1Q66K89 784 aaPredicted RBP12□□□□□ -0.49
CLSTN1-203ENST00000435891 UTP14AQ9BVJ6 771 aaKnown RBP12□□□□□ -0.49
CLSTN1-203ENST00000435891 NEMFO60524 1076 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 SSRP1Q08945 709 aaKnown RBP11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 HSP90AA4PQ58FG1 418 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 SHISA4Q96DD7 197 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 CCDC87Q9NVE4 849 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■□□ 15.7
CLSTN1-203ENST00000435891 V9GYY5 206 aaPredicted RBP11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 FANCCQ00597 558 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms