RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 IFIT3O14879 490 aaKnown RBP28.78■■■□□ 2.2
LMBR1-209ENST00000434453 ZRSR1Q15695 479 aaKnown RBP28.78■■■□□ 2.2
LMBR1-209ENST00000434453 LCORLQ8N3X6 602 aa28.78■■■□□ 2.2
LMBR1-209ENST00000434453 CCDC94Q9BW85 323 aaPredicted RBP28.78■■■□□ 2.2
LMBR1-209ENST00000434453 XPO4Q9C0E2 1151 aaKnown RBP28.78■■■□□ 2.2
LMBR1-209ENST00000434453 HSD3B7Q9H2F3 369 aa28.78■■■□□ 2.2
LMBR1-209ENST00000434453 TUBE1Q9UJT0 475 aa28.78■■■□□ 2.2
LMBR1-209ENST00000434453 NID2Q14112 1375 aa28.77■■■□□ 2.2
LMBR1-209ENST00000434453 STK36Q9NRP7 1315 aa28.77■■■□□ 2.2
LMBR1-209ENST00000434453 NYAP1Q6ZVC0 841 aa28.77■■■□□ 2.2
LMBR1-209ENST00000434453 CLIC6Q96NY7 704 aa28.77■■■□□ 2.2
LMBR1-209ENST00000434453 SLC12A7Q9Y666 1083 aa28.77■■■□□ 2.2
LMBR1-209ENST00000434453 UTP14AQ9BVJ6 771 aaKnown RBP28.77■■■□□ 2.2
LMBR1-209ENST00000434453 SLC26A6Q9BXS9 759 aa28.77■■■□□ 2.2
LMBR1-209ENST00000434453 GUCY1A2P33402 732 aa28.76■■■□□ 2.19
LMBR1-209ENST00000434453 RESP18Q5W5W9 173 aa28.76■■■□□ 2.19
LMBR1-209ENST00000434453 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.76■■■□□ 2.19
LMBR1-209ENST00000434453 CCDC87Q9NVE4 849 aa28.76■■■□□ 2.19
LMBR1-209ENST00000434453 IFNKQ9P0W0 207 aa28.76■■■□□ 2.19
LMBR1-209ENST00000434453 CAMTA2O94983 1202 aa28.75■■■□□ 2.19
LMBR1-209ENST00000434453 FMNL1O95466 1100 aaPredicted RBP28.75■■■□□ 2.19
LMBR1-209ENST00000434453 CRKLP46109 303 aaKnown RBP28.75■■■□□ 2.19
LMBR1-209ENST00000434453 CNNM2Q9H8M5 875 aa28.75■■■□□ 2.19
LMBR1-209ENST00000434453 RREB1Q92766 1687 aa28.75■■■□□ 2.19
LMBR1-209ENST00000434453 ISM2Q6H9L7 571 aa28.75■■■□□ 2.19
LMBR1-209ENST00000434453 LAMB2P55268 1798 aa28.75■■■□□ 2.19
LMBR1-209ENST00000434453 PNPLA7Q6ZV29 1317 aa28.75■■■□□ 2.19
LMBR1-209ENST00000434453 IFNAR1P17181 557 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 GNL2Q13823 731 aaKnown RBP28.74■■■□□ 2.19
LMBR1-209ENST00000434453 MFSD6Q6ZSS7 791 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 JMYQ8N9B5 988 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 STAG1Q8WVM7 1258 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 IMPACTQ9P2X3 320 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 PAXBP1Q9Y5B6 917 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 BCL9LQ86UU0 1499 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 GSDMDP57764 484 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 SSRP1Q08945 709 aaKnown RBP28.74■■■□□ 2.19
LMBR1-209ENST00000434453 KRT23Q9C075 422 aa28.74■■■□□ 2.19
LMBR1-209ENST00000434453 TRIM29Q14134 588 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 CEP135Q66GS9 1140 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 ZKSCAN3Q9BRR0 538 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 KCND1Q9NSA2 647 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 SMC2O95347 1197 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 NCBP1Q09161 790 aaKnown RBP28.73■■■□□ 2.19
LMBR1-209ENST00000434453 PNOCQ13519 176 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 ARMCX5Q6P1M9 558 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 CCAR2Q8N163 923 aaKnown RBP28.73■■■□□ 2.19
LMBR1-209ENST00000434453 SLC4A4Q9Y6R1 1079 aa28.73■■■□□ 2.19
LMBR1-209ENST00000434453 IKBKBO14920 756 aa28.72■■■□□ 2.19
LMBR1-209ENST00000434453 NTSR2O95665 410 aa28.72■■■□□ 2.19
LMBR1-209ENST00000434453 TOB1P50616 345 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-209ENST00000434453 METTL16Q86W50 562 aaKnown RBP28.71■■■□□ 2.19
LMBR1-209ENST00000434453 RTL9Q8NET4 1388 aa28.71■■■□□ 2.19
LMBR1-209ENST00000434453 CCDC152Q4G0S7 254 aa28.71■■■□□ 2.19
LMBR1-209ENST00000434453 RRP12Q5JTH9 1297 aaKnown RBP28.71■■■□□ 2.19
LMBR1-209ENST00000434453 FOXP4Q8IVH2 680 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-209ENST00000434453 NOSTRINQ8IVI9 506 aa28.71■■■□□ 2.19
LMBR1-209ENST00000434453 MIGA1Q8NAN2 632 aa28.71■■■□□ 2.19
LMBR1-209ENST00000434453 BTBD18B2RXH4 712 aa28.7■■■□□ 2.19
LMBR1-209ENST00000434453 CUTAO60888 179 aa28.7■■■□□ 2.19
LMBR1-209ENST00000434453 ATP1A3P13637 1013 aa28.7■■■□□ 2.19
LMBR1-209ENST00000434453 LMOD1P29536 600 aaPredicted RBP28.7■■■□□ 2.19
LMBR1-209ENST00000434453 TDO2P48775 406 aa28.7■■■□□ 2.19
LMBR1-209ENST00000434453 ADGRA1Q86SQ6 560 aa28.7■■■□□ 2.19
LMBR1-209ENST00000434453 TRMT1Q9NXH9 659 aaKnown RBP28.7■■■□□ 2.19
LMBR1-209ENST00000434453 MYH6P13533 1939 aa28.7■■■□□ 2.19
LMBR1-209ENST00000434453 MMP1P03956 469 aa28.7■■■□□ 2.18
LMBR1-209ENST00000434453 GNAT2P19087 354 aa28.7■■■□□ 2.18
LMBR1-209ENST00000434453 ATP6V1AP38606 617 aa28.7■■■□□ 2.18
LMBR1-209ENST00000434453 ITPK1Q13572 414 aa28.7■■■□□ 2.18
LMBR1-209ENST00000434453 LONRF3Q496Y0 759 aa28.7■■■□□ 2.18
LMBR1-209ENST00000434453 TMC6Q7Z403 805 aa28.7■■■□□ 2.18
LMBR1-209ENST00000434453 STK11IPQ8N1F8 1099 aa28.7■■■□□ 2.18
LMBR1-209ENST00000434453 CHRNDQ07001 517 aa28.69■■■□□ 2.18
LMBR1-209ENST00000434453 PARP10Q53GL7 1025 aa28.69■■■□□ 2.18
LMBR1-209ENST00000434453 KCNJ14Q9UNX9 436 aa28.69■■■□□ 2.18
LMBR1-209ENST00000434453 COL22A1Q8NFW1 1626 aaPredicted RBP28.69■■■□□ 2.18
LMBR1-209ENST00000434453 TAF1P21675 1872 aa28.69■■■□□ 2.18
LMBR1-209ENST00000434453 CCDC112Q8NEF3 446 aa28.69■■■□□ 2.18
LMBR1-209ENST00000434453 NACAP1Q9BZK3 213 aa28.69■■■□□ 2.18
LMBR1-209ENST00000434453 A0A1B0GUL6 1792 aa28.69■■■□□ 2.18
LMBR1-209ENST00000434453 IGHMBP2P38935 993 aaKnown RBP28.68■■■□□ 2.18
LMBR1-209ENST00000434453 FANCCQ00597 558 aa28.68■■■□□ 2.18
LMBR1-209ENST00000434453 PTPN14Q15678 1187 aa28.68■■■□□ 2.18
LMBR1-209ENST00000434453 RTN1Q16799 776 aa28.68■■■□□ 2.18
LMBR1-209ENST00000434453 PDCL2Q8N4E4 241 aa28.68■■■□□ 2.18
LMBR1-209ENST00000434453 ZNF592Q92610 1267 aa28.68■■■□□ 2.18
LMBR1-209ENST00000434453 KCNH3Q9ULD8 1083 aa28.68■■■□□ 2.18
LMBR1-209ENST00000434453 LOC102724428A0A0B4J2F2 783 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 SIK1P57059 783 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 NAA30Q147X3 362 aaPredicted RBP28.67■■■□□ 2.18
LMBR1-209ENST00000434453 WTAPQ15007 396 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 SYCP1Q15431 976 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 PPP4R3BQ5MIZ7 849 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 CMTR1Q8N1G2 835 aaKnown RBP28.67■■■□□ 2.18
LMBR1-209ENST00000434453 NIP7Q9Y221 180 aaKnown RBP eCLIP28.67■■■□□ 2.18
LMBR1-209ENST00000434453 MYH2Q9UKX2 1941 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 SMIM22K7EJ46 135 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 E4F1Q66K89 784 aaPredicted RBP28.67■■■□□ 2.18
LMBR1-209ENST00000434453 KRBA2Q6ZNG9 492 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms