RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 CLIP2Q9UDT6 1046 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 ADCY9O60503 1353 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 FLT4P35916 1363 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 LY75O60449 1722 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 MAP3K19Q56UN5 1328 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 PNPLA7Q6ZV29 1317 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 SCAMP3O14828 347 aaKnown RBP9.35□□□□□ -0.91
VTI1A-202ENST00000432306 ATP8B1O43520 1251 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 SLU7O95391 586 aaKnown RBP9.35□□□□□ -0.91
VTI1A-202ENST00000432306 IL2RBP14784 551 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 YBX3P16989 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
VTI1A-202ENST00000432306 ZKSCAN1P17029 563 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-202ENST00000432306 GSDMDP57764 484 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 CCZ1BP86790 482 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 CCZ1P86791 482 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-202ENST00000432306 ADCK5Q3MIX3 580 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 CDC37L1Q7L3B6 337 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 SLC43A3Q8NBI5 491 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 TIGD1Q96MW7 591 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 RPS6KC1Q96S38 1066 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 TFCP2L1Q9NZI6 479 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 IMPACTQ9P2X3 320 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 NFAT5O94916 1531 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 LTN1O94822 1766 aa9.35□□□□□ -0.91
VTI1A-202ENST00000432306 BDNFP23560 247 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 CYP2C19P33261 490 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
VTI1A-202ENST00000432306 GYS2P54840 703 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 PTPN14Q15678 1187 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 TPD52L1Q16890 204 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-202ENST00000432306 TTC13Q8NBP0 860 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 JAKMIP1Q96N16 626 aaKnown RBP9.34□□□□□ -0.91
VTI1A-202ENST00000432306 ZSCAN16Q9H4T2 348 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-202ENST00000432306 HMG20BQ9P0W2 317 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 NRBP1Q9UHY1 535 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 ZNF215Q9UL58 517 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-202ENST00000432306 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
VTI1A-202ENST00000432306 SURF6O75683 361 aaKnown RBP9.34□□□□□ -0.92
VTI1A-202ENST00000432306 HSD3B2P26439 372 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 PPP4CP60510 307 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 BMS1Q14692 1282 aaKnown RBP9.34□□□□□ -0.92
VTI1A-202ENST00000432306 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 FBXO38Q6PIJ6 1188 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 CCAR2Q8N163 923 aaKnown RBP9.34□□□□□ -0.92
VTI1A-202ENST00000432306 TINF2Q9BSI4 451 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 UBXN6Q9BZV1 441 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 IL1RAPL2Q9NP60 686 aa9.34□□□□□ -0.92
VTI1A-202ENST00000432306 RFX7Q2KHR2 1363 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 MED23Q9ULK4 1368 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 VPS37CA5D8V6 355 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-202ENST00000432306 PTH1RQ03431 593 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 RESTQ13127 1097 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 STX1AQ16623 288 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 USPL1Q5W0Q7 1092 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 PPP2R2DQ66LE6 453 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 CREB3L3Q68CJ9 461 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 CWC27Q6UX04 472 aaKnown RBP9.33□□□□□ -0.92
VTI1A-202ENST00000432306 NUTM1Q86Y26 1132 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 ERC1Q8IUD2 1116 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 CXorf38Q8TB03 319 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 PCDH12Q9NPG4 1184 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 ECHDC1Q9NTX5 307 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 FBXO9Q9UK97 447 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-202ENST00000432306 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
VTI1A-202ENST00000432306 USP54Q70EL1 1684 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 MRC1P22897 1456 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 CEMIPQ8WUJ3 1361 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 COL9A1P20849 921 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 RPS6KB1P23443 525 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 RAD51AP2Q09MP3 1159 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 BEND3Q5T5X7 828 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
VTI1A-202ENST00000432306 OTUD5Q96G74 571 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 ZSWIM4Q9H7M6 989 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 RCOR1Q9UKL0 485 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 CFAP45Q9UL16 551 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 HDAC5Q9UQL6 1122 aa9.32□□□□□ -0.92
VTI1A-202ENST00000432306 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 GOLGA6L4A6NEF3 574 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SLC27A2O14975 620 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 NR1I2O75469 434 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 ZRANB2O95218 330 aaKnown RBP eCLIP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 S100BP04271 92 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SKILP12757 684 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SSTR3P32745 418 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 TAGLNQ01995 201 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms