RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 LINC00301Q8NCQ3 95 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 THRAP3Q9Y2W1 955 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 AKAP12Q02952 1782 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 AHDC1Q5TGY3 1603 aaPredicted RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 PRDM1O75626 825 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 SLU7O95391 586 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 PHKA1P46020 1223 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 GNG11P61952 73 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 BARGINQ6ZT62 677 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 ZNF274Q96GC6 653 aaPredicted RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 HOOK1Q9UJC3 728 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 ANGEL1Q9UNK9 670 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 FMN2Q9NZ56 1722 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 NEMFO60524 1076 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 ZFYP08048 801 aaPredicted RBP9.25□□□□□ -0.93
HPS4-205ENST00000429411 IQCB1Q15051 598 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 KIF28PB7ZC32 967 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 H7C1W4 665 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 MAP3K12Q12852 859 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 ARHGAP29Q52LW3 1261 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 USPL1Q5W0Q7 1092 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 MFSD6Q6ZSS7 791 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 GRAMD1CQ8IYS0 662 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 KCNB2Q92953 911 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 SLC4A4Q9Y6R1 1079 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 BTBD18B2RXH4 712 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 FDPSP14324 419 aaKnown RBP9.25□□□□□ -0.93
HPS4-205ENST00000429411 SMARCC2Q8TAQ2 1214 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 DHX58Q96C10 678 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 NACAP1Q9BZK3 213 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 SENP2Q9HC62 589 aa9.25□□□□□ -0.93
HPS4-205ENST00000429411 CPDO75976 1380 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 SH3TC1Q8TE82 1336 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 POLR2DO15514 142 aaKnown RBP9.24□□□□□ -0.93
HPS4-205ENST00000429411 ADKP55263 362 aaKnown RBP9.24□□□□□ -0.93
HPS4-205ENST00000429411 TCIRG1Q13488 830 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 MRFAP1L1Q96HT8 127 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 FANCLQ9NW38 375 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 HLFQ16534 295 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 TMCO4Q5TGY1 634 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 DHX40Q8IX18 779 aaKnown RBP9.24□□□□□ -0.93
HPS4-205ENST00000429411 CABP5Q9NP86 173 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 ARGLU1Q9NWB6 273 aaPredicted RBP9.24□□□□□ -0.93
HPS4-205ENST00000429411 SLIT2O94813 1529 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 CBFA2T2O43439 604 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 PRKAB2O43741 272 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 WTAPQ15007 396 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 RABL6Q3YEC7 729 aaPredicted RBP9.24□□□□□ -0.93
HPS4-205ENST00000429411 BRAPQ7Z569 592 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
HPS4-205ENST00000429411 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
HPS4-205ENST00000429411 DESI2Q9BSY9 194 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 LZTFL1Q9NQ48 299 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 KCNH3Q9ULD8 1083 aa9.24□□□□□ -0.93
HPS4-205ENST00000429411 FOXN1O15353 648 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 MCAMP43121 646 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 EXOSC10Q01780 885 aaKnown RBP9.23□□□□□ -0.93
HPS4-205ENST00000429411 MYL5Q02045 173 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 TSGA10IPQ3SY00 556 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
HPS4-205ENST00000429411 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 CCDC150Q8NCX0 1101 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 CARD6Q9BX69 1037 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 MAPK8IP1Q9UQF2 711 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 UTYO14607 1347 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 ATRNO75882 1429 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 SIK1P57059 783 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 NLRP12P59046 1061 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 IRX3P78415 501 aaPredicted RBP9.23□□□□□ -0.93
HPS4-205ENST00000429411 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
HPS4-205ENST00000429411 DHX8Q14562 1220 aaKnown RBP9.23□□□□□ -0.93
HPS4-205ENST00000429411 RTN1Q16799 776 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 CYB5R4Q7L1T6 521 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 PPFIBP1Q86W92 1011 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 TBC1D10CQ8IV04 446 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 SMARCE1Q969G3 411 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 EPC1Q9H2F5 836 aa9.23□□□□□ -0.93
HPS4-205ENST00000429411 UTP14CQ5TAP6 766 aaKnown RBP9.22□□□□□ -0.93
HPS4-205ENST00000429411 TMCO3Q6UWJ1 677 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 DZIP3Q86Y13 1208 aaKnown RBP9.22□□□□□ -0.93
HPS4-205ENST00000429411 PIH1D3Q9NQM4 214 aaKnown RBP9.22□□□□□ -0.93
HPS4-205ENST00000429411 PCDHA5Q9Y5H7 936 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 WDHD1O75717 1129 aaPredicted RBP9.22□□□□□ -0.93
HPS4-205ENST00000429411 PDE6AP16499 860 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 CYP7A1P22680 504 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 CASP1P29466 404 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 NR5A1Q13285 461 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 APOA5Q6Q788 366 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 KRT222Q8N1A0 295 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 ZNF397Q8NF99 534 aaPredicted RBP9.22□□□□□ -0.93
HPS4-205ENST00000429411 SDR42E1Q8WUS8 393 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 LRRC4BQ9NT99 713 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms