RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 FAM169AQ9Y6X4 670 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 CDC25AP30304 524 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 CDC23Q9UJX2 597 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 FLT4P35916 1363 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 CCDC175P0C221 793 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 CASP1P29466 404 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 OLFM4Q6UX06 510 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 CNPY4Q8N129 248 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
SEC61A1-202ENST00000424880 KIF5CO60282 957 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 CPLX2Q6PUV4 134 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 KAZALD1Q96I82 304 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 CENPHQ9H3R5 247 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 STX10O60499 249 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 RBL2Q08999 1139 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 KCTD19Q17RG1 926 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 METTL16Q86W50 562 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 FAM71BQ8TC56 605 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 HMG20BQ9P0W2 317 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 CAPN7Q9Y6W3 813 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 MED23Q9ULK4 1368 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 A0A087WUV0 522 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 H0YHG0 523 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 MYBL2P10244 700 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 HOXC9P31274 260 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 BPIFA3Q9BQP9 254 aa12.86□□□□□ -0.35
SEC61A1-202ENST00000424880 CTAGE15A4D2H0 777 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 CTAGE8P0CG41 777 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 CTAGE6Q86UF2 777 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 CTAGE4Q8IX94 777 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 HIP1O00291 1037 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 IKBKBO14920 756 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 GRIN1Q05586 938 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 KRT32Q14532 448 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 ANO1Q5XXA6 986 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
SEC61A1-202ENST00000424880 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 PATL2C9JE40 543 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 SLC24A3Q9HC58 644 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 SSBP05455 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 EGFL6Q8IUX8 553 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 KCNG4Q8TDN1 519 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 GUCA1BQ9UMX6 200 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 A0A1W2PQ27 194 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 A0A1W2PQ64 194 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 A0A1W2PQD8 194 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 E7EWF7 191 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 GOLIM4O00461 696 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 ZNF609O15014 1411 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 EPHA10Q5JZY3 1008 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 MED15Q96RN5 788 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 RAB21Q9UL25 225 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
SEC61A1-202ENST00000424880 KDRP35968 1356 aa12.83□□□□□ -0.35
SEC61A1-202ENST00000424880 CCDC189A1A4V9 331 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 EBAG9O00559 213 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 CASP14P31944 242 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 ACTN3Q08043 901 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 TFCP2Q12800 502 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 CEP112Q8N8E3 955 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 PHKBQ93100 1093 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 NEUROD6Q96NK8 337 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 FAM107BQ9H098 131 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 SEC31BQ9NQW1 1179 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 CPLX1O14810 134 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 ZEB2O60315 1214 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 USP5P45974 858 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 ATP1A2P50993 1020 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 TBX2Q13207 712 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 MAP9Q49MG5 647 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 KCTD16Q68DU8 428 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
SEC61A1-202ENST00000424880 ALDH8A1Q9H2A2 487 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms