RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ATRNL1Q5VV63 1379 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 LOC285556D6RIA3 1793 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 ECM2O94769 699 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-205ENST00000423214 EN2P19622 333 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-205ENST00000423214 BTDP43251 543 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 PICALMQ13492 652 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 GORABQ5T7V8 394 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 GCC1Q96CN9 775 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 NEUROD6Q96NK8 337 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 CPA4Q9UI42 421 aa19.96■□□□□ 0.79
COL18A1-205ENST00000423214 PRMT2P55345 433 aa19.95■□□□□ 0.78
COL18A1-205ENST00000423214 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
COL18A1-205ENST00000423214 ZFPM1Q8IX07 1006 aa19.95■□□□□ 0.78
COL18A1-205ENST00000423214 SCYL3Q8IZE3 742 aa19.95■□□□□ 0.78
COL18A1-205ENST00000423214 PARK7Q99497 189 aaKnown RBP19.95■□□□□ 0.78
COL18A1-205ENST00000423214 MYCP01106 439 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-205ENST00000423214 GNAI2P04899 355 aa19.94■□□□□ 0.78
COL18A1-205ENST00000423214 TRIM27P14373 513 aa19.94■□□□□ 0.78
COL18A1-205ENST00000423214 C17orf99Q6UX52 265 aa19.94■□□□□ 0.78
COL18A1-205ENST00000423214 ATF7IPQ6VMQ6 1270 aa19.94■□□□□ 0.78
COL18A1-205ENST00000423214 SH3TC2Q8TF17 1288 aa19.94■□□□□ 0.78
COL18A1-205ENST00000423214 CXCL11O14625 94 aa19.93■□□□□ 0.78
COL18A1-205ENST00000423214 ADGRA2Q96PE1 1338 aa19.93■□□□□ 0.78
COL18A1-205ENST00000423214 FMNL1O95466 1100 aaPredicted RBP19.92■□□□□ 0.78
COL18A1-205ENST00000423214 HOXD10P28358 340 aa19.92■□□□□ 0.78
COL18A1-205ENST00000423214 PSMC4P43686 418 aa19.92■□□□□ 0.78
COL18A1-205ENST00000423214 GSTO1P78417 241 aa19.92■□□□□ 0.78
COL18A1-205ENST00000423214 MECOMQ03112 1051 aa19.92■□□□□ 0.78
COL18A1-205ENST00000423214 GADL1Q6ZQY3 521 aa19.92■□□□□ 0.78
COL18A1-205ENST00000423214 CLUAP1Q96AJ1 413 aa19.92■□□□□ 0.78
COL18A1-205ENST00000423214 FAM163AQ96GL9 167 aaPredicted RBP19.92■□□□□ 0.78
COL18A1-205ENST00000423214 DDX4Q9NQI0 724 aaKnown RBP19.92■□□□□ 0.78
COL18A1-205ENST00000423214 SIPA1L1O43166 1804 aa19.92■□□□□ 0.78
COL18A1-205ENST00000423214 PHF20L1A8MW92 1017 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 G3BP1Q13283 466 aaKnown RBP eCLIP19.91■□□□□ 0.78
COL18A1-205ENST00000423214 SH3BP5LQ7L8J4 393 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 FASTKD5Q7L8L6 764 aaKnown RBP19.91■□□□□ 0.78
COL18A1-205ENST00000423214 SPATA5Q8NB90 893 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 RAET1EQ8TD07 263 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 TRIM47Q96LD4 638 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 SRRDQ9UH36 339 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 TNNQ9UQP3 1299 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 ZHX2Q9Y6X8 837 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 MYPNQ86TC9 1320 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 DOCK3Q8IZD9 2030 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 COL2A1P02458 1487 aaPredicted RBP19.91■□□□□ 0.78
COL18A1-205ENST00000423214 CEP290O15078 2479 aa19.91■□□□□ 0.78
COL18A1-205ENST00000423214 MYH1P12882 1939 aa19.9■□□□□ 0.78
COL18A1-205ENST00000423214 A0A0G2JLL6 359 aaPredicted RBP19.9■□□□□ 0.78
COL18A1-205ENST00000423214 DDTLA6NHG4 134 aaPredicted RBP19.9■□□□□ 0.78
COL18A1-205ENST00000423214 BCAR3O75815 825 aa19.9■□□□□ 0.78
COL18A1-205ENST00000423214 PTPRAP18433 802 aa19.9■□□□□ 0.78
COL18A1-205ENST00000423214 MOGSQ13724 837 aa19.9■□□□□ 0.78
COL18A1-205ENST00000423214 PRRT2Q7Z6L0 340 aaPredicted RBP19.9■□□□□ 0.78
COL18A1-205ENST00000423214 RAI14Q9P0K7 980 aa19.9■□□□□ 0.78
COL18A1-205ENST00000423214 HMG20BQ9P0W2 317 aa19.9■□□□□ 0.78
COL18A1-205ENST00000423214 GPR75-ASB3A0A0A6YYF3 556 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 PNMA6EA0A0J9YXQ4 647 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 LDHCP07864 332 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 CYP2C8P10632 490 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 OSBPP22059 807 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 ARID4AP29374 1257 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-205ENST00000423214 FCGRTP55899 365 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 PI16Q6UXB8 463 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 NOL10Q9BSC4 688 aaKnown RBP19.89■□□□□ 0.77
COL18A1-205ENST00000423214 PCDH10Q9P2E7 1040 aa19.89■□□□□ 0.77
COL18A1-205ENST00000423214 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-205ENST00000423214 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
COL18A1-205ENST00000423214 UQCRFS1P1P0C7P4 283 aa19.88■□□□□ 0.77
COL18A1-205ENST00000423214 CTGFP29279 349 aa19.88■□□□□ 0.77
COL18A1-205ENST00000423214 GPAT2Q6NUI2 795 aa19.88■□□□□ 0.77
COL18A1-205ENST00000423214 TRIM75PA6NK02 468 aa19.87■□□□□ 0.77
COL18A1-205ENST00000423214 MAP4K4O95819 1239 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-205ENST00000423214 GRK4P32298 578 aa19.87■□□□□ 0.77
COL18A1-205ENST00000423214 RHBDL3P58872 404 aa19.87■□□□□ 0.77
COL18A1-205ENST00000423214 OS9Q13438 667 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-205ENST00000423214 ZKSCAN2Q63HK3 967 aa19.87■□□□□ 0.77
COL18A1-205ENST00000423214 SMCR8Q8TEV9 937 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-205ENST00000423214 ZNF384Q8TF68 577 aa19.87■□□□□ 0.77
COL18A1-205ENST00000423214 NSUN4Q96CB9 384 aaKnown RBP19.87■□□□□ 0.77
COL18A1-205ENST00000423214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL18A1-205ENST00000423214 LRP2BPQ9P2M1 347 aa19.87■□□□□ 0.77
COL18A1-205ENST00000423214 AFG3L2Q9Y4W6 797 aa19.87■□□□□ 0.77
COL18A1-205ENST00000423214 BCRP11274 1271 aa19.86■□□□□ 0.77
COL18A1-205ENST00000423214 MCAMP43121 646 aa19.86■□□□□ 0.77
COL18A1-205ENST00000423214 MAP3K10Q02779 954 aa19.86■□□□□ 0.77
COL18A1-205ENST00000423214 TBC1D9Q6ZT07 1266 aa19.86■□□□□ 0.77
COL18A1-205ENST00000423214 TMEM57Q8N5G2 664 aa19.86■□□□□ 0.77
COL18A1-205ENST00000423214 BIN2Q9UBW5 565 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-205ENST00000423214 SLC45A1Q9Y2W3 748 aa19.86■□□□□ 0.77
COL18A1-205ENST00000423214 FAM196BA6NMK8 535 aa19.85■□□□□ 0.77
COL18A1-205ENST00000423214 NPM3O75607 178 aaKnown RBP19.85■□□□□ 0.77
COL18A1-205ENST00000423214 SLURP2P0DP57 97 aa19.85■□□□□ 0.77
COL18A1-205ENST00000423214 TTC39AQ5SRH9 613 aa19.85■□□□□ 0.77
COL18A1-205ENST00000423214 FTSJ3Q8IY81 847 aaKnown RBP19.85■□□□□ 0.77
COL18A1-205ENST00000423214 TEX11Q8IYF3 940 aa19.85■□□□□ 0.77
COL18A1-205ENST00000423214 OSBPL5Q9H0X9 879 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-205ENST00000423214 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-205ENST00000423214 TBC1D12O60347 775 aa19.84■□□□□ 0.77
COL18A1-205ENST00000423214 UBXN2AP68543 259 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms