RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 DZIP1Q86YF9 867 aaKnown RBP23.1■■□□□ 1.29
AC004540.1-203ENST00000421862 SCYL3Q8IZE3 742 aa23.1■■□□□ 1.29
AC004540.1-203ENST00000421862 SH3TC2Q8TF17 1288 aa23.1■■□□□ 1.29
AC004540.1-203ENST00000421862 TRIM47Q96LD4 638 aa23.1■■□□□ 1.29
AC004540.1-203ENST00000421862 CPA4Q9UI42 421 aa23.1■■□□□ 1.29
AC004540.1-203ENST00000421862 MYO5AQ9Y4I1 1855 aaKnown RBP23.1■■□□□ 1.29
AC004540.1-203ENST00000421862 SRGAP3O43295 1099 aa23.09■■□□□ 1.29
AC004540.1-203ENST00000421862 TIMM10P62072 90 aa23.09■■□□□ 1.29
AC004540.1-203ENST00000421862 GPAT2Q6NUI2 795 aa23.09■■□□□ 1.29
AC004540.1-203ENST00000421862 XAGE2Q96GT9 111 aa23.09■■□□□ 1.29
AC004540.1-203ENST00000421862 PARK7Q99497 189 aaKnown RBP23.09■■□□□ 1.29
AC004540.1-203ENST00000421862 DDX4Q9NQI0 724 aaKnown RBP23.09■■□□□ 1.29
AC004540.1-203ENST00000421862 SRRDQ9UH36 339 aa23.09■■□□□ 1.29
AC004540.1-203ENST00000421862 CEP290O15078 2479 aa23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 A0A0G2JLL6 359 aaPredicted RBP23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 BCRP11274 1271 aa23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 TFCP2Q12800 502 aa23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 MVPQ14764 893 aaKnown RBP23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 PRRT2Q7Z6L0 340 aaPredicted RBP23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 SLF2Q8IX21 1173 aa23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 ZNF384Q8TF68 577 aa23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 AKAP2Q9Y2D5 859 aa23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.08■■□□□ 1.29
AC004540.1-203ENST00000421862 DDTLA6NHG4 134 aaPredicted RBP23.07■■□□□ 1.28
AC004540.1-203ENST00000421862 PTPRAP18433 802 aa23.07■■□□□ 1.28
AC004540.1-203ENST00000421862 OSBPP22059 807 aa23.07■■□□□ 1.28
AC004540.1-203ENST00000421862 BTDP43251 543 aa23.07■■□□□ 1.28
AC004540.1-203ENST00000421862 PSMC4P43686 418 aa23.07■■□□□ 1.28
AC004540.1-203ENST00000421862 SPTY2D1Q68D10 685 aaPredicted RBP23.07■■□□□ 1.28
AC004540.1-203ENST00000421862 ABCF2Q9UG63 623 aa23.07■■□□□ 1.28
AC004540.1-203ENST00000421862 NPM3O75607 178 aaKnown RBP23.06■■□□□ 1.28
AC004540.1-203ENST00000421862 TRIM27P14373 513 aa23.06■■□□□ 1.28
AC004540.1-203ENST00000421862 RHBDL3P58872 404 aa23.06■■□□□ 1.28
AC004540.1-203ENST00000421862 SLC4A8Q2Y0W8 1093 aa23.06■■□□□ 1.28
AC004540.1-203ENST00000421862 DOCK3Q8IZD9 2030 aa23.05■■□□□ 1.28
AC004540.1-203ENST00000421862 GPR75-ASB3A0A0A6YYF3 556 aa23.05■■□□□ 1.28
AC004540.1-203ENST00000421862 MECOMQ03112 1051 aa23.05■■□□□ 1.28
AC004540.1-203ENST00000421862 HABP4Q5JVS0 413 aaKnown RBP23.05■■□□□ 1.28
AC004540.1-203ENST00000421862 SHISA4Q96DD7 197 aa23.05■■□□□ 1.28
AC004540.1-203ENST00000421862 SLC45A1Q9Y2W3 748 aa23.05■■□□□ 1.28
AC004540.1-203ENST00000421862 AFG3L2Q9Y4W6 797 aa23.05■■□□□ 1.28
AC004540.1-203ENST00000421862 ARID4AP29374 1257 aaPredicted RBP23.04■■□□□ 1.28
AC004540.1-203ENST00000421862 PICK1Q9NRD5 415 aa23.04■■□□□ 1.28
AC004540.1-203ENST00000421862 HMG20BQ9P0W2 317 aa23.04■■□□□ 1.28
AC004540.1-203ENST00000421862 ZHX2Q9Y6X8 837 aa23.04■■□□□ 1.28
AC004540.1-203ENST00000421862 MYPNQ86TC9 1320 aa23.04■■□□□ 1.28
AC004540.1-203ENST00000421862 CTNND1O60716 968 aaKnown RBP23.03■■□□□ 1.28
AC004540.1-203ENST00000421862 CYP2C8P10632 490 aa23.03■■□□□ 1.28
AC004540.1-203ENST00000421862 HOXD10P28358 340 aa23.03■■□□□ 1.28
AC004540.1-203ENST00000421862 ERICH6Q7L0X2 663 aa23.03■■□□□ 1.28
AC004540.1-203ENST00000421862 FASTKD5Q7L8L6 764 aaKnown RBP23.03■■□□□ 1.28
AC004540.1-203ENST00000421862 TBC1D12O60347 775 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 MAP4K4O95819 1239 aaPredicted RBP23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 SLURP2P0DP57 97 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 GRK4P32298 578 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 PICALMQ13492 652 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 MTFR1Q15390 333 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 PI16Q6UXB8 463 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 ATF7IPQ6VMQ6 1270 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 ZSCAN29Q8IWY8 852 aaPredicted RBP23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 NSUN4Q96CB9 384 aaKnown RBP23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 TNNQ9UQP3 1299 aa23.02■■□□□ 1.28
AC004540.1-203ENST00000421862 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
AC004540.1-203ENST00000421862 FMNL1O95466 1100 aaPredicted RBP23.01■■□□□ 1.27
AC004540.1-203ENST00000421862 MYCP01106 439 aaPredicted RBP23.01■■□□□ 1.27
AC004540.1-203ENST00000421862 SPATA5Q8NB90 893 aa23.01■■□□□ 1.27
AC004540.1-203ENST00000421862 IPO8O15397 1037 aaKnown RBP23■■□□□ 1.27
AC004540.1-203ENST00000421862 ECM2O94769 699 aaPredicted RBP23■■□□□ 1.27
AC004540.1-203ENST00000421862 GNAI2P04899 355 aa23■■□□□ 1.27
AC004540.1-203ENST00000421862 FCGRTP55899 365 aa23■■□□□ 1.27
AC004540.1-203ENST00000421862 PRKCZQ05513 592 aa23■■□□□ 1.27
AC004540.1-203ENST00000421862 RAET1EQ8TD07 263 aa23■■□□□ 1.27
AC004540.1-203ENST00000421862 PLXNB2O15031 1838 aa22.99■■□□□ 1.27
AC004540.1-203ENST00000421862 MCAMP43121 646 aa22.99■■□□□ 1.27
AC004540.1-203ENST00000421862 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.99■■□□□ 1.27
AC004540.1-203ENST00000421862 GSTO1P78417 241 aa22.98■■□□□ 1.27
AC004540.1-203ENST00000421862 GADL1Q6ZQY3 521 aa22.98■■□□□ 1.27
AC004540.1-203ENST00000421862 UBE2Q1Q7Z7E8 422 aa22.98■■□□□ 1.27
AC004540.1-203ENST00000421862 NEUROD6Q96NK8 337 aa22.98■■□□□ 1.27
AC004540.1-203ENST00000421862 OSBPL5Q9H0X9 879 aaPredicted RBP22.98■■□□□ 1.27
AC004540.1-203ENST00000421862 AGTPBP1Q9UPW5 1226 aa22.98■■□□□ 1.27
AC004540.1-203ENST00000421862 ALPK3Q96L96 1907 aa22.98■■□□□ 1.27
AC004540.1-203ENST00000421862 BCAR3O75815 825 aa22.97■■□□□ 1.27
AC004540.1-203ENST00000421862 LDHCP07864 332 aa22.97■■□□□ 1.27
AC004540.1-203ENST00000421862 GJA8P48165 433 aa22.97■■□□□ 1.27
AC004540.1-203ENST00000421862 SLAIN1Q8ND83 568 aa22.97■■□□□ 1.27
AC004540.1-203ENST00000421862 NKX2-3Q8TAU0 364 aa22.97■■□□□ 1.27
AC004540.1-203ENST00000421862 MYH1P12882 1939 aa22.96■■□□□ 1.27
AC004540.1-203ENST00000421862 TRIM75PA6NK02 468 aa22.96■■□□□ 1.27
AC004540.1-203ENST00000421862 GJB1P08034 283 aa22.96■■□□□ 1.27
AC004540.1-203ENST00000421862 TBC1D9Q6ZT07 1266 aa22.96■■□□□ 1.27
AC004540.1-203ENST00000421862 CCDC84Q86UT8 332 aaPredicted RBP22.96■■□□□ 1.27
AC004540.1-203ENST00000421862 GABRQQ9UN88 632 aa22.96■■□□□ 1.27
AC004540.1-203ENST00000421862 TRIOBPQ9H2D6 2365 aa22.96■■□□□ 1.27
AC004540.1-203ENST00000421862 FAM196BA6NMK8 535 aa22.95■■□□□ 1.26
AC004540.1-203ENST00000421862 UQCRFS1P1P0C7P4 283 aa22.95■■□□□ 1.26
AC004540.1-203ENST00000421862 CCL5P13501 91 aa22.95■■□□□ 1.26
AC004540.1-203ENST00000421862 POLA2Q14181 598 aa22.95■■□□□ 1.26
AC004540.1-203ENST00000421862 DDX60LQ5H9U9 1706 aaKnown RBP22.95■■□□□ 1.26
AC004540.1-203ENST00000421862 PROCA1Q8NCQ7 364 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms