RNA–Protein interactions for RNA: ENST00000420665.5

LRRFIP1-205, Transcript of LRR binding FLII interacting protein 1, human

TSL 3

Gene LRRFIP1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-205	ENST00000420665	ZBTB47	Q9UFB7	747 aa	Predicted RBP	29.21	■■■□□ 2.27
LRRFIP1-205	ENST00000420665	NPM3	O75607	178 aa	Known RBP	29.2	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	ANKRD45	Q5TZF3	282 aa		29.2	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	MIGA2	Q7L4E1	593 aa		29.2	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	SH3BP5L	Q7L8J4	393 aa		29.2	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	MIGA1	Q8NAN2	632 aa		29.2	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	29.2	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	CSRNP1	Q96S65	589 aa		29.2	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	ATRNL1	Q5VV63	1379 aa		29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	FOXN1	O15353	648 aa		29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	PDE6A	P16499	860 aa		29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	MKRN3	Q13064	507 aa	Known RBP	29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	SLC9C2	Q5TAH2	1124 aa		29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	OTUD7A	Q8TE49	926 aa	Predicted RBP	29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	WRNIP1	Q96S55	665 aa		29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	BEGAIN	Q9BUH8	593 aa		29.19	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	DYNLL1	P63167	89 aa	Known RBP	29.18	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	VGLL4	Q14135	290 aa		29.18	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	29.18	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	ZNF341	Q9BYN7	854 aa		29.18	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	AK9	Q5TCS8	1911 aa		29.18	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	COL2A1	P02458	1487 aa	Predicted RBP	29.17	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	DDTL	A6NHG4	134 aa	Predicted RBP	29.17	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	MAP3K9	P80192	1104 aa		29.17	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	SPRYD7	Q5W111	196 aa		29.17	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.17	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	ELP3	Q9H9T3	547 aa		29.17	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	CSAD	Q9Y600	493 aa		29.17	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	IGHD	P01880	384 aa		29.16	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	CERS3	Q8IU89	383 aa		29.16	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	WNK4	Q96J92	1243 aa		29.16	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	TTC41P	Q6P2S7	1318 aa		29.16	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	SMC5	Q8IY18	1101 aa		29.15	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	TGFBRAP1	Q8WUH2	860 aa		29.15	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	ZNF532	Q9HCE3	1301 aa		29.15	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	FOCAD	Q5VW36	1801 aa		29.15	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	CDK5RAP2	Q96SN8	1893 aa		29.14	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	ZBTB48	P10074	688 aa	Predicted RBP	29.14	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	MX1	P20591	662 aa		29.14	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	ZKSCAN4	Q969J2	545 aa	Predicted RBP	29.14	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	29.14	■■■□□ 2.26
LRRFIP1-205	ENST00000420665	FLT1	P17948	1338 aa		29.14	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	TCRBV5S4A2T	A0A5A2	114 aa		29.13	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	MAPKAPK5	Q8IW41	473 aa		29.13	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	OPTN	Q96CV9	577 aa		29.13	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	SNCAIP	Q9Y6H5	919 aa		29.13	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	SALL3	Q9BXA9	1300 aa		29.13	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	ERC2	O15083	957 aa		29.12	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	ADD2	P35612	726 aa		29.12	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	GJA5	P36382	358 aa		29.12	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	CTCF	P49711	727 aa	Predicted RBP	29.12	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	REM2	Q8IYK8	340 aa	Predicted RBP	29.12	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	PI4K2B	Q8TCG2	481 aa		29.12	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	RIOK1	Q9BRS2	568 aa	Known RBP	29.12	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	MAGEB6P1	A0A0J9YX57	407 aa		29.11	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	CA12	O43570	354 aa		29.11	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	INPP5B	P32019	993 aa		29.11	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	CNKSR2	Q8WXI2	1034 aa		29.11	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	ZNF112	Q9UJU3	913 aa		29.11	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	GLRX3	O76003	335 aa	Known RBP	29.1	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	SLURP2	P0DP57	97 aa		29.1	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	SLFNL1	Q499Z3	407 aa		29.1	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	B4GALNT3	Q6L9W6	998 aa		29.1	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	LNPK	Q9C0E8	428 aa		29.1	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	LAMB1	P07942	1786 aa		29.1	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	HSPA8	P11142	646 aa	Known RBP	29.09	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	MAP3K10	Q02779	954 aa		29.09	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	SREBF2	Q12772	1141 aa		29.09	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	TSKS	Q9UJT2	592 aa		29.09	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	MYH7	P12883	1935 aa		29.09	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	SPDYE5	A6NIY4	337 aa		29.08	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	CHGB	P05060	677 aa		29.08	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	USP5	P45974	858 aa		29.08	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	ZSCAN25	Q6NSZ9	544 aa		29.08	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	KBTBD3	Q8NAB2	608 aa		29.08	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	OTUD5	Q96G74	571 aa		29.08	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	DHX36	Q9H2U1	1008 aa	Known RBP	29.08	■■■□□ 2.25
LRRFIP1-205	ENST00000420665	MANSC4	A6NHS7	340 aa	Predicted RBP	29.07	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	FAM196B	A6NMK8	535 aa		29.07	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	UBE3C	Q15386	1083 aa		29.07	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	SAP30BP	Q9UHR5	308 aa	Known RBP	29.07	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	SIPA1L1	O43166	1804 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	PHF20L1	A8MW92	1017 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	TM4SF4	P48230	202 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	LBX1	P52954	281 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	NOL9	Q5SY16	702 aa	Known RBP	29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	ERO1B	Q86YB8	467 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	LCORL	Q8N3X6	602 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	29.06	■■■□□ 2.24	3e-8	■■□□□ 12.6
LRRFIP1-205	ENST00000420665	RNF186	Q9NXI6	227 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	SAGE1	Q9NXZ1	904 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	PALD1	Q9ULE6	856 aa		29.06	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	TBC1D12	O60347	775 aa		29.05	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	NUCB1	Q02818	461 aa		29.05	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	CHD1L	Q86WJ1	897 aa		29.05	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	CRNKL1	Q9BZJ0	848 aa	Known RBP	29.05	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	PI4KB	Q9UBF8	816 aa		29.05	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	STAP2	Q9UGK3	403 aa		29.05	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	DDX60L	Q5H9U9	1706 aa	Known RBP	29.05	■■■□□ 2.24
LRRFIP1-205	ENST00000420665	TRPA1	O75762	1119 aa		29.04	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms