RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 DLK2Q6UY11 383 aa15.35■□□□□ 0.05
ATG4B-208ENST00000419606 USP50Q70EL3 339 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-208ENST00000419606 IDI2Q9BXS1 227 aa15.35■□□□□ 0.05
ATG4B-208ENST00000419606 MYO1BO43795 1136 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 FGAP02671 866 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 SLURP2P0DP57 97 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 VEGFAP15692 232 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-208ENST00000419606 GNAT2P19087 354 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 SH3BP5LQ7L8J4 393 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 CDAN1Q8IWY9 1227 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 MAP4K1Q92918 833 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 DSCC1Q9BVC3 393 aa15.34■□□□□ 0.05
ATG4B-208ENST00000419606 RBM8AQ9Y5S9 174 aaKnown RBP15.34■□□□□ 0.05
ATG4B-208ENST00000419606 TDO2P48775 406 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 CERS3Q8IU89 383 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 USP26Q9BXU7 913 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 TMEM39BQ9GZU3 492 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-208ENST00000419606 ATP8A2Q9NTI2 1148 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 TMOD2Q9NZR1 351 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 PALD1Q9ULE6 856 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 TAF6LQ9Y6J9 622 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 SIPA1L1O43166 1804 aa15.33■□□□□ 0.04
ATG4B-208ENST00000419606 LAMB1P07942 1786 aa15.32■□□□□ 0.04
ATG4B-208ENST00000419606 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-208ENST00000419606 USP17L12C9JPN9 530 aa15.32■□□□□ 0.04
ATG4B-208ENST00000419606 USP17L21D6R901 530 aa15.32■□□□□ 0.04
ATG4B-208ENST00000419606 ALX1Q15699 326 aa15.32■□□□□ 0.04
ATG4B-208ENST00000419606 PRAMEF18Q5VWM3 479 aa15.32■□□□□ 0.04
ATG4B-208ENST00000419606 MCM9Q9NXL9 1143 aa15.32■□□□□ 0.04
ATG4B-208ENST00000419606 TACC3Q9Y6A5 838 aa15.32■□□□□ 0.04
ATG4B-208ENST00000419606 ADM5C9JUS6 153 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 REC8O95072 547 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 PLCD1P51178 756 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 HAND2P61296 217 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 RASA3Q14644 834 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 FKBP1CQ5VVH2 108 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-208ENST00000419606 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 FAM151AQ8WW52 585 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 NAPBQ9H115 298 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 PGAP2Q9UHJ9 254 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-208ENST00000419606 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
ATG4B-208ENST00000419606 MINDY4BA8MYZ0 360 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 ENTPD3O75355 529 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 YY1P25490 414 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 CTDSPL2Q05D32 466 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 NACAP1Q9BZK3 213 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 NBPF3Q9H094 633 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 INCENPQ9NQS7 918 aa15.3■□□□□ 0.04
ATG4B-208ENST00000419606 U3KPZ7 1027 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-208ENST00000419606 ZMYM6O95789 1325 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 PITPNM2Q9BZ72 1349 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 SLC27A2O14975 620 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 POLR3DP05423 398 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 FMR1Q06787 632 aaKnown RBP eCLIP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 C12orf60Q5U649 245 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 USP48Q86UV5 1035 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 FAM83AQ86UY5 434 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 APOBEC3FQ8IUX4 373 aaKnown RBP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 RASEFQ8IZ41 740 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 NKX2-3Q8TAU0 364 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 DCPSQ96C86 337 aaKnown RBP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 TEPSINQ96N21 525 aa15.29■□□□□ 0.04
ATG4B-208ENST00000419606 GLIS2Q9BZE0 524 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 GPBP1L1Q9HC44 474 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-208ENST00000419606 FAM196BA6NMK8 535 aa15.28■□□□□ 0.04
ATG4B-208ENST00000419606 CYP21A2P08686 494 aa15.28■□□□□ 0.04
ATG4B-208ENST00000419606 TNNI2P48788 182 aa15.28■□□□□ 0.04
ATG4B-208ENST00000419606 PPARAQ07869 468 aa15.28■□□□□ 0.04
ATG4B-208ENST00000419606 COL9A3Q14050 684 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-208ENST00000419606 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
ATG4B-208ENST00000419606 NBPF12Q5TAG4 269 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-208ENST00000419606 ZSCAN29Q8IWY8 852 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-208ENST00000419606 ZC3H15Q8WU90 426 aaKnown RBP15.28■□□□□ 0.04
ATG4B-208ENST00000419606 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
ATG4B-208ENST00000419606 ATRNL1Q5VV63 1379 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 KIF3CO14782 793 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 HSPA4P34932 840 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 STOX1Q6ZVD7 989 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 KRT26Q7Z3Y9 468 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 TBC1D10CQ8IV04 446 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 SLC44A5Q8NCS7 719 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 ARPP21Q9UBL0 812 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-208ENST00000419606 FZD1Q9UP38 647 aa15.27■□□□□ 0.04
ATG4B-208ENST00000419606 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.03
ATG4B-208ENST00000419606 TRAF5O00463 557 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 ZNF213O14771 459 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 TNFAIP1Q13829 316 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 238.8 ms