RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 NEFHP12036 1026 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 YY1P25490 414 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 MTIF2P46199 727 aaKnown RBP19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 ADCY7P51828 1080 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 ALKQ9UM73 1620 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 SEPT7Q16181 437 aaKnown RBP19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 MRPL11Q9Y3B7 192 aaKnown RBP19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 DIP2CQ9Y2E4 1556 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 LZTS2Q9BRK4 669 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 CHRNA5P30532 468 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 CAVIN1Q6NZI2 390 aaKnown RBP19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 C20orf194Q5TEA3 1177 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 AKNAD1Q5T1N1 836 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 TAF4BQ92750 862 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 CDC42BPAQ5VT25 1732 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 TBC1D9BQ66K14 1250 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 FAM43AQ8N2R8 423 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 METTL13Q8N6R0 699 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 RAET1EQ8TD07 263 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 ATP10DQ9P241 1426 aa19.25■□□□□ 0.67
SYNGAP1-202ENST00000418600 KMT5BQ4FZB7 885 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 ZBED2Q9BTP6 218 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 MTFR1LQ9H019 292 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 SWAP70Q9UH65 585 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 GPAA1O43292 621 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 GJB2P29033 226 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 CTDSPL2Q05D32 466 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 ENOX2Q16206 610 aaKnown RBP19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 ZHX1Q9UKY1 873 aaPredicted RBP19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 AGLP35573 1532 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 GOLGA6L10A6NI86 522 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 ECE1P42892 770 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 RMND1Q9NWS8 449 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 CPSF1Q10570 1443 aaKnown RBP19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 CCDC169A6NNP5 214 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 CTNNA2P26232 953 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 KANK3Q6NY19 840 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 TFAP4Q01664 338 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 ZNF341Q9BYN7 854 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 COMMD10Q9Y6G5 202 aa19.24■□□□□ 0.67
SYNGAP1-202ENST00000418600 MIGA2Q7L4E1 593 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 MTERF4Q7Z6M4 381 aaKnown RBP19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 TULP4Q9NRJ4 1543 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 NACA2Q9H009 215 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 CEP152O94986 1710 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 RETREG2Q8NC44 543 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 SEC31BQ9NQW1 1179 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 CCPG1Q9ULG6 757 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 KCNH4Q9UQ05 1017 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 B4E1Z4 1266 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 SORBS3O60504 671 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 PRKCSHP14314 528 aaPredicted RBP19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 EZRP15311 586 aaKnown RBP19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 UTP14CQ5TAP6 766 aaKnown RBP19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 TBC1D9Q6ZT07 1266 aa19.23■□□□□ 0.67
SYNGAP1-202ENST00000418600 KIAA1328Q86T90 577 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 H0YHG0 523 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 MCM7P33993 719 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 MRE11P49959 708 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 KIF4BQ2VIQ3 1234 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 SCAND2PQ9GZW5 306 aaPredicted RBP19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 CPS1P31327 1500 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 PNMA8AQ86V59 439 aaPredicted RBP19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 ABI1Q8IZP0 508 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 FAM200AQ8TCP9 573 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 PANK2Q9BZ23 570 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 SLC8A3P57103 927 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 CIZ1Q9ULV3 898 aaPredicted RBP19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 SUSD4Q5VX71 490 aa19.22■□□□□ 0.67
SYNGAP1-202ENST00000418600 ADD3Q9UEY8 706 aaKnown RBP19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 SKIV2LQ15477 1246 aaKnown RBP19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 ELMSAN1Q6PJG2 1045 aa19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 NLRP10Q86W26 655 aa19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 FER1L4A9Z1Z3 1794 aa19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 GCOM1H8Y6P7 765 aaPredicted RBP19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 POLR2MP0CAP2 368 aa19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 NUCB1Q02818 461 aa19.21■□□□□ 0.67
SYNGAP1-202ENST00000418600 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 FAM47AQ5JRC9 791 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 CCDC102BQ68D86 513 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 RNF214Q8ND24 703 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 BRIP1Q9BX63 1249 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 SSH2Q76I76 1423 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 UBXN2AP68543 259 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 SPA17Q15506 151 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 MRPS9P82933 396 aaKnown RBP19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 SMC1AQ14683 1233 aaKnown RBP19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 NPC1L1Q9UHC9 1359 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 RXRAP19793 462 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 MFSD14CQ5VZR4 134 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 IQCEQ6IPM2 695 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 CCDC172P0C7W6 258 aa19.2■□□□□ 0.66
SYNGAP1-202ENST00000418600 NASPP49321 788 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms