RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	IRS2	Q9Y4H2	1338 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651		A0A1W2PPC1	479 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PCCA	P05165	728 aa	Predicted RBP	11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GGCX	P38435	758 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	SUPT20HL1	Q3ZLR7	823 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	C17orf99	Q6UX52	265 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	NUDT18	Q6ZVK8	323 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	MTMR14	Q8NCE2	650 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TTLL11	Q8NHH1	800 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	ZNF775	Q96BV0	537 aa	Predicted RBP	11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TMEM39B	Q9GZU3	492 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	CD209	Q9NNX6	404 aa		11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	BSDC1	Q9NW68	430 aa	Predicted RBP	11.25	□□□□□ -0.61
NIF3L1-206	ENST00000416651	ELN	P15502	786 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GTF2A2	P52657	109 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PRKCZ	Q05513	592 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	RIC3	Q7Z5B4	369 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	HELB	Q8NG08	1087 aa	Predicted RBP	11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PAWR	Q96IZ0	340 aa	Known RBP	11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	FAM161B	Q96MY7	647 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GUCD1	Q96NT3	240 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TDRD3	Q9H7E2	651 aa	Known RBP	11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PRDM6	Q9NQX0	595 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	SNCAIP	Q9Y6H5	919 aa		11.24	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TCP10L2	B9ZVM9	353 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	CHL1	O00533	1208 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	IRF6	O14896	467 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TAF5L	O75529	589 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	SGPL1	O95470	568 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	CTSW	P56202	376 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	NEUROD2	Q15784	382 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GRIK5	Q16478	980 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	C7orf61	Q8IZ16	206 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	RAET1E	Q8TD07	263 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	CDHR5	Q9HBB8	845 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	BIN2	Q9UBW5	565 aa	Predicted RBP	11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	ZNF70	Q9UC06	446 aa	Predicted RBP	11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PPP2R3B	Q9Y5P8	575 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	MYPN	Q86TC9	1320 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	ADGRA2	Q96PE1	1338 aa		11.23	□□□□□ -0.61
NIF3L1-206	ENST00000416651	EYS	Q5T1H1	3165 aa		11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	UNCX	A6NJT0	531 aa		11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	FMNL1	O95466	1100 aa	Predicted RBP	11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TMPO	P42166	694 aa	Known RBP	11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	MAGEA10	P43363	369 aa	Predicted RBP	11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	RBM5	P52756	815 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	CACNB3	P54284	484 aa		11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	COPS2	P61201	443 aa		11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	KIF22	Q14807	665 aa		11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	ARHGEF6	Q15052	776 aa		11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	DEFB118	Q96PH6	123 aa		11.22	□□□□□ -0.61
NIF3L1-206	ENST00000416651	SPDYE5	A6NIY4	337 aa		11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	IGKV5-2	P06315	115 aa		11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	BMP8B	P34820	402 aa		11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	DUSP27	Q5VZP5	1158 aa		11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TSHZ2	Q9NRE2	1034 aa		11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	CWC25	Q9NXE8	425 aa	Predicted RBP	11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	DBF4	Q9UBU7	674 aa	Predicted RBP	11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	LEMD3	Q9Y2U8	911 aa		11.21	□□□□□ -0.61
NIF3L1-206	ENST00000416651	MAPK8IP3	Q9UPT6	1336 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	ELL2	O00472	640 aa	Predicted RBP	11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TFRC	P02786	760 aa	Known RBP	11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	NEFM	P07197	916 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MOGS	Q13724	837 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	LRIT3	Q3SXY7	679 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CCDC146	Q8IYE0	955 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CCDC191	Q8NCU4	936 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CDC5L	Q99459	802 aa	Known RBP	11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TMUB1	Q9BVT8	246 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	HYPK	Q9NX55	129 aa		11.2	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TTC28	Q96AY4	2481 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	ARAP2	Q8WZ64	1704 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	INHA	P05111	366 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CYP2C8	P10632	490 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CETP	P11597	493 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	PRMT2	P55345	433 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CHRND	Q07001	517 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TRIM26	Q12899	539 aa	Predicted RBP	11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CWF19L2	Q2TBE0	894 aa	Known RBP	11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TTC13	Q8NBP0	860 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	BABAM1	Q9NWV8	329 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MGAM	O43451	1857 aa		11.19	□□□□□ -0.62
NIF3L1-206	ENST00000416651	RPTOR	Q8N122	1335 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MYH3	P11055	1940 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	PDHX	O00330	501 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MYO1B	O43795	1136 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	ADCY3	O60266	1144 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	GNRH1	P01148	92 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	INPP5B	P32019	993 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TDH	Q8IZJ6	230 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	METTL22	Q9BUU2	404 aa	Predicted RBP	11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	DOCK3	Q8IZD9	2030 aa		11.18	□□□□□ -0.62
NIF3L1-206	ENST00000416651	PRUNE2	Q8WUY3	3088 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	BCR	P11274	1271 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	IL1R1	P14778	569 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	ITGA6	P23229	1130 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms