RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 TIMM10P62072 90 aa15.41■□□□□ 0.06
SMARCA4-202ENST00000413806 RHOXF2Q9BQY4 288 aa15.41■□□□□ 0.06
SMARCA4-202ENST00000413806 DSCC1Q9BVC3 393 aa15.41■□□□□ 0.06
SMARCA4-202ENST00000413806 CTNND2Q9UQB3 1225 aa15.41■□□□□ 0.06
SMARCA4-202ENST00000413806 F8W031 263 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-202ENST00000413806 ZNF174Q15697 407 aa15.41■□□□□ 0.06
SMARCA4-202ENST00000413806 CBX8Q9HC52 389 aa15.41■□□□□ 0.06
SMARCA4-202ENST00000413806 GPAA1O43292 621 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 VAV2P52735 878 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 GCKRQ14397 625 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 TSNARE1Q96NA8 513 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 BRD1O95696 1058 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 ARFGAP2Q8N6H7 521 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 TTC14Q96N46 770 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 IGSF22Q8N9C0 903 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 EYA3Q99504 573 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 IMPG2Q9BZV3 1241 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 SH3TC1Q8TE82 1336 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 CHMP4BP1P59074 171 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 VWA3BQ502W6 1294 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 CNNM4Q6P4Q7 775 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 CYP26C1Q6V0L0 522 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 TRMT1LQ7Z2T5 733 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
SMARCA4-202ENST00000413806 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 FANCCQ00597 558 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 ZC3H12CQ9C0D7 883 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 SAMD15Q9P1V8 674 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 PLEKHG3A1L390 1219 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 EVCP57679 992 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 EIF4A1P60842 406 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 PPP2R3AQ06190 1150 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 CCDC122Q5T0U0 273 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 PPFIBP2Q8ND30 876 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 ZKSCAN3Q9BRR0 538 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 NOL3O60936 208 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 ATP5JP18859 108 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 PCK1P35558 622 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 FAM89AQ96GI7 184 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 ATP11AP98196 1134 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 ARID5AQ03989 594 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 DMTNQ08495 405 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 SREK1Q8WXA9 508 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 GLT8D2Q9H1C3 349 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 ARMT1Q9H993 441 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 STK24Q9Y6E0 443 aa15.39■□□□□ 0.05
SMARCA4-202ENST00000413806 SYNRGQ9UMZ2 1314 aa15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 KIF3CO14782 793 aa15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 NAPGQ99747 312 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 LGR6Q9HBX8 967 aa15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 NOC4LQ9BVI4 516 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 MRPL12P52815 198 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 LPIN2Q92539 896 aa15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 NUP58Q9BVL2 599 aa15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 KDRP35968 1356 aa15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 B4DLN1 442 aa15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-202ENST00000413806 KDM5CP41229 1560 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 CFAP74Q9C0B2 1584 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 FAM135BQ49AJ0 1406 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 RPAINQ86UA6 219 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 SSH3Q8TE77 659 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 STIM2Q9P246 746 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 MROH5Q6ZUA9 1318 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 PPP1R14CQ8TAE6 165 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 MTRF1LQ9UGC7 380 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 AP1ARQ63HQ0 302 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 CDC37L1Q7L3B6 337 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 SMC6Q96SB8 1091 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 MAGI3Q5TCQ9 1506 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 ZNF202O95125 648 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 TTC38Q5R3I4 469 aa15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 IQCGQ9H095 443 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-202ENST00000413806 RNF168Q8IYW5 571 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 GCKP35557 465 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 PDE4DQ08499 809 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 LETM2Q2VYF4 491 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 KLHDC4Q8TBB5 520 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 TOM1O60784 492 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 GADD45BO75293 160 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 CCT6AP40227 531 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 PAK1Q13153 545 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 ELF2Q15723 593 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 EPB41P11171 864 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 PIK3AP1Q6ZUJ8 805 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 TEX11Q8IYF3 940 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 LRRC45Q96CN5 670 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 LZTS2Q9BRK4 669 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 GSPT1P15170 499 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 TBC1D8BQ0IIM8 1120 aa15.36■□□□□ 0.05
SMARCA4-202ENST00000413806 NDUFAB1O14561 156 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 MTUS1Q9ULD2 1270 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms