RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 BCRP11274 1271 aa20.74■□□□□ 0.91
MRPL55-220ENST00000411464 CCL5P13501 91 aa20.74■□□□□ 0.91
MRPL55-220ENST00000411464 PTPRAP18433 802 aa20.74■□□□□ 0.91
MRPL55-220ENST00000411464 ADORA1P30542 326 aa20.74■□□□□ 0.91
MRPL55-220ENST00000411464 SPTY2D1Q68D10 685 aaPredicted RBP20.74■□□□□ 0.91
MRPL55-220ENST00000411464 COPRSQ9NQ92 184 aa20.74■□□□□ 0.91
MRPL55-220ENST00000411464 A0A0G2JLL6 359 aaPredicted RBP20.73■□□□□ 0.91
MRPL55-220ENST00000411464 ZBTB22O15209 634 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 GJA8P48165 433 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 TIMM10P62072 90 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 PRKCZQ05513 592 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 GADL1Q6ZQY3 521 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 PRRT2Q7Z6L0 340 aaPredicted RBP20.73■□□□□ 0.91
MRPL55-220ENST00000411464 SHISA4Q96DD7 197 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 AFG3L2Q9Y4W6 797 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 GAKO14976 1311 aa20.73■□□□□ 0.91
MRPL55-220ENST00000411464 CTNND1O60716 968 aaKnown RBP20.72■□□□□ 0.91
MRPL55-220ENST00000411464 CT47B1P0C2W7 299 aaPredicted RBP20.72■□□□□ 0.91
MRPL55-220ENST00000411464 RASGRF1Q13972 1273 aa20.72■□□□□ 0.91
MRPL55-220ENST00000411464 SLAIN1Q8ND83 568 aa20.72■□□□□ 0.91
MRPL55-220ENST00000411464 FAM163AQ96GL9 167 aaPredicted RBP20.72■□□□□ 0.91
MRPL55-220ENST00000411464 MAP3K10Q02779 954 aa20.71■□□□□ 0.91
MRPL55-220ENST00000411464 SH3BP5LQ7L8J4 393 aa20.71■□□□□ 0.91
MRPL55-220ENST00000411464 HTATIP2Q9BUP3 242 aa20.71■□□□□ 0.91
MRPL55-220ENST00000411464 AKAP2Q9Y2D5 859 aa20.71■□□□□ 0.91
MRPL55-220ENST00000411464 SLC45A1Q9Y2W3 748 aa20.71■□□□□ 0.91
MRPL55-220ENST00000411464 ATRNL1Q5VV63 1379 aa20.71■□□□□ 0.91
MRPL55-220ENST00000411464 DDTLA6NHG4 134 aaPredicted RBP20.7■□□□□ 0.9
MRPL55-220ENST00000411464 BTDP43251 543 aa20.7■□□□□ 0.9
MRPL55-220ENST00000411464 PICALMQ13492 652 aa20.7■□□□□ 0.9
MRPL55-220ENST00000411464 CHRDL2Q6WN34 429 aa20.7■□□□□ 0.9
MRPL55-220ENST00000411464 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
MRPL55-220ENST00000411464 SMCR8Q8TEV9 937 aaPredicted RBP20.7■□□□□ 0.9
MRPL55-220ENST00000411464 GABRQQ9UN88 632 aa20.7■□□□□ 0.9
MRPL55-220ENST00000411464 PDS5AQ29RF7 1337 aaKnown RBP20.7■□□□□ 0.9
MRPL55-220ENST00000411464 TRIM75PA6NK02 468 aa20.69■□□□□ 0.9
MRPL55-220ENST00000411464 MVPQ14764 893 aaKnown RBP20.69■□□□□ 0.9
MRPL55-220ENST00000411464 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
MRPL55-220ENST00000411464 MEIS3Q99687 375 aa20.69■□□□□ 0.9
MRPL55-220ENST00000411464 DDX4Q9NQI0 724 aaKnown RBP20.69■□□□□ 0.9
MRPL55-220ENST00000411464 A0A1B0GUL7 405 aa20.68■□□□□ 0.9
MRPL55-220ENST00000411464 TNPO2O14787 897 aaKnown RBP20.68■□□□□ 0.9
MRPL55-220ENST00000411464 ADCY3O60266 1144 aa20.68■□□□□ 0.9
MRPL55-220ENST00000411464 FLT3LGP49771 235 aa20.68■□□□□ 0.9
MRPL55-220ENST00000411464 U2AF1L4Q8WU68 220 aaKnown RBP20.68■□□□□ 0.9
MRPL55-220ENST00000411464 XAGE2Q96GT9 111 aa20.68■□□□□ 0.9
MRPL55-220ENST00000411464 ZSWIM8A7E2V4 1837 aa20.68■□□□□ 0.9
MRPL55-220ENST00000411464 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
MRPL55-220ENST00000411464 GPR75-ASB3A0A0A6YYF3 556 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 SRGAP3O43295 1099 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 GNAI3P08754 354 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 SLURP2P0DP57 97 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 MECOMQ03112 1051 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 TFCP2Q12800 502 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 UBE2Q1Q7Z7E8 422 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 NEUROD6Q96NK8 337 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 UNC93B1Q9H1C4 597 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 NR2E3Q9Y5X4 410 aa20.67■□□□□ 0.9
MRPL55-220ENST00000411464 TBC1D12O60347 775 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 FARP2O94887 1054 aaPredicted RBP20.66■□□□□ 0.9
MRPL55-220ENST00000411464 SGPL1O95470 568 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 LDHCP07864 332 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 GSTO1P78417 241 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 GORABQ5T7V8 394 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 PXYLP1Q8TE99 480 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.66■□□□□ 0.9
MRPL55-220ENST00000411464 AGTPBP1Q9UPW5 1226 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 RFX7Q2KHR2 1363 aa20.66■□□□□ 0.9
MRPL55-220ENST00000411464 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
MRPL55-220ENST00000411464 ELNP15502 786 aa20.65■□□□□ 0.9
MRPL55-220ENST00000411464 RHBDL3P58872 404 aa20.65■□□□□ 0.9
MRPL55-220ENST00000411464 ANKRD13CQ8N6S4 541 aa20.65■□□□□ 0.9
MRPL55-220ENST00000411464 COA7Q96BR5 231 aa20.65■□□□□ 0.9
MRPL55-220ENST00000411464 RBM27Q9P2N5 1060 aaKnown RBP20.65■□□□□ 0.9
MRPL55-220ENST00000411464 PNMA3Q9UL41 463 aa20.65■□□□□ 0.9
MRPL55-220ENST00000411464 MAP4K4O95819 1239 aaPredicted RBP20.64■□□□□ 0.89
MRPL55-220ENST00000411464 TFRCP02786 760 aaKnown RBP20.64■□□□□ 0.89
MRPL55-220ENST00000411464 INHAP05111 366 aa20.64■□□□□ 0.89
MRPL55-220ENST00000411464 CAPN2P17655 700 aa20.64■□□□□ 0.89
MRPL55-220ENST00000411464 IRF5Q13568 498 aa20.64■□□□□ 0.89
MRPL55-220ENST00000411464 CCDC84Q86UT8 332 aaPredicted RBP20.64■□□□□ 0.89
MRPL55-220ENST00000411464 ARHGAP45Q92619 1136 aa20.64■□□□□ 0.89
MRPL55-220ENST00000411464 TAOK2Q9UL54 1235 aa20.64■□□□□ 0.89
MRPL55-220ENST00000411464 AK9Q5TCS8 1911 aa20.63■□□□□ 0.89
MRPL55-220ENST00000411464 RARSP54136 660 aaKnown RBP20.63■□□□□ 0.89
MRPL55-220ENST00000411464 SPATA5Q8NB90 893 aa20.63■□□□□ 0.89
MRPL55-220ENST00000411464 OSBPL5Q9H0X9 879 aaPredicted RBP20.63■□□□□ 0.89
MRPL55-220ENST00000411464 HMG20BQ9P0W2 317 aa20.63■□□□□ 0.89
MRPL55-220ENST00000411464 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.63■□□□□ 0.89
MRPL55-220ENST00000411464 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
MRPL55-220ENST00000411464 SPP2Q13103 211 aa20.62■□□□□ 0.89
MRPL55-220ENST00000411464 MTX1Q13505 466 aa20.62■□□□□ 0.89
MRPL55-220ENST00000411464 TBC1D9Q6ZT07 1266 aa20.62■□□□□ 0.89
MRPL55-220ENST00000411464 PROCA1Q8NCQ7 364 aaPredicted RBP20.62■□□□□ 0.89
MRPL55-220ENST00000411464 DEFB118Q96PH6 123 aa20.62■□□□□ 0.89
MRPL55-220ENST00000411464 RAI14Q9P0K7 980 aa20.62■□□□□ 0.89
MRPL55-220ENST00000411464 PABPC4Q13310 644 aaKnown RBP eCLIP20.61■□□□□ 0.899e-7■■■■■ 28.5
MRPL55-220ENST00000411464 FAM110CQ1W6H9 321 aa20.61■□□□□ 0.89
MRPL55-220ENST00000411464 TREML2Q5T2D2 321 aa20.61■□□□□ 0.89
MRPL55-220ENST00000411464 ZNF280CQ8ND82 737 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms