RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 TNFRSF10BO14763 440 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 TGM1P22735 817 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 ZNF438Q7Z4V0 828 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 FRMD5Q7Z6J6 570 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 NPAS4Q8IUM7 802 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 ADAMTS19Q8TE59 1207 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 TRIM56Q9BRZ2 755 aaKnown RBP4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 SCAND2PQ9GZW5 306 aaPredicted RBP4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 SAP130Q9H0E3 1048 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 ATXN3LQ9H3M9 355 aa4.91□□□□□ -1.62
RNU4-61P-201ENST00000411243 SWI5Q1ZZU3 235 aa4.9□□□□□ -1.63
RNU4-61P-201ENST00000411243 LARP1Q6PKG0 1096 aaKnown RBP4.9□□□□□ -1.63
RNU4-61P-201ENST00000411243 ALPK1Q96QP1 1244 aa4.9□□□□□ -1.63
RNU4-61P-201ENST00000411243 CORO1BQ9BR76 489 aa4.9□□□□□ -1.63
RNU4-61P-201ENST00000411243 MRIQ9BWK5 157 aa4.9□□□□□ -1.63
RNU4-61P-201ENST00000411243 GTF2IRD1Q9UHL9 959 aa4.9□□□□□ -1.63
RNU4-61P-201ENST00000411243 TEX51A0A1B0GUA7 166 aa4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 SLPIP03973 132 aa4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 C16orf46Q6P387 395 aa4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 IRF2BP1Q8IU81 584 aa4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 DACT3Q96B18 629 aaPredicted RBP4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 FANCD2OSQ96PS1 177 aa4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 CHRDQ9H2X0 955 aa4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 ATP13A1Q9HD20 1204 aa4.89□□□□□ -1.63
RNU4-61P-201ENST00000411243 PI3P19957 117 aa4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 AFF3P51826 1226 aaKnown RBP4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 PCDH1Q08174 1060 aa4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 FKBP5Q13451 457 aaPredicted RBP4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 ZNF827Q17R98 1081 aa4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 ZNF423Q2M1K9 1284 aa4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 ANKMY2Q8IV38 441 aa4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 SYT8Q8NBV8 401 aa4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 MYLIPQ8WY64 445 aa4.88□□□□□ -1.63
RNU4-61P-201ENST00000411243 HNRNPA0Q13151 305 aaKnown RBP4.87□□□□□ -1.63
RNU4-61P-201ENST00000411243 TTC6Q86TZ1 520 aa4.87□□□□□ -1.63
RNU4-61P-201ENST00000411243 LUC7LQ9NQ29 371 aaKnown RBP4.87□□□□□ -1.63
RNU4-61P-201ENST00000411243 K7ESM1 405 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 PDE3AQ14432 1141 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 XKR5Q6UX68 686 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 ZNF605Q86T29 641 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 PANK1Q8TE04 598 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 PMEPA1Q969W9 287 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 RNF32Q9H0A6 362 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 CLEC4MQ9H2X3 399 aaPredicted RBP4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 DISC1Q9NRI5 854 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 PCOLCE2Q9UKZ9 415 aa4.86□□□□□ -1.63
RNU4-61P-201ENST00000411243 GNAT3A8MTJ3 354 aa4.85□□□□□ -1.63
RNU4-61P-201ENST00000411243 HPXP02790 462 aa4.85□□□□□ -1.63
RNU4-61P-201ENST00000411243 ERVFC1P60507 584 aa4.85□□□□□ -1.63
RNU4-61P-201ENST00000411243 ID3Q02535 119 aa4.85□□□□□ -1.63
RNU4-61P-201ENST00000411243 TTLL4Q14679 1199 aa4.85□□□□□ -1.63
RNU4-61P-201ENST00000411243 RTP5Q14D33 572 aa4.85□□□□□ -1.63
RNU4-61P-201ENST00000411243 COG6Q9Y2V7 657 aa4.85□□□□□ -1.63
RNU4-61P-201ENST00000411243 METTL12A8MUP2 240 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L15C9J2P7 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L10C9JJH3 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L13C9JLJ4 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L12C9JPN9 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L11C9JVI0 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L21D6R901 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L18D6R9N7 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L22D6RA61 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L17D6RBQ6 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L19D6RCP7 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L20D6RJB6 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 EDN3P14138 238 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 MAGEA10P43363 369 aaPredicted RBP4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 ADAM17P78536 824 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 USP17L24Q0WX57 530 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 NUDT16Q96DE0 195 aaKnown RBP4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 SGPP1Q9BX95 441 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 SLC6A17Q9H1V8 727 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 SLAMF8Q9P0V8 285 aa4.84□□□□□ -1.63
RNU4-61P-201ENST00000411243 FAM196BA6NMK8 535 aa4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 C1QTNF3-AMACRE9PGA6 284 aa4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 PRICKLE3O43900 615 aaPredicted RBP4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 RNGTTO60942 597 aaKnown RBP4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 HCLS1P14317 486 aaPredicted RBP4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 HSPA12BQ96MM6 686 aa4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 ARXQ96QS3 562 aa4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 PCDHGC5Q9Y5F6 944 aa4.83□□□□□ -1.64
RNU4-61P-201ENST00000411243 CYR61O00622 381 aa4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 ZBTB39O15060 712 aa4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 CILPO75339 1184 aa4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 NEFMP07197 916 aa4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 GDF5P43026 501 aa4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 SIGLEC10Q96LC7 697 aa4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 ZNF552Q9H707 407 aaPredicted RBP4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 MAFBQ9Y5Q3 323 aaPredicted RBP4.82□□□□□ -1.64
RNU4-61P-201ENST00000411243 B3GALT4O96024 378 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 C6P13671 934 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 TMEM132EQ6IEE7 984 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 WWC1Q8IX03 1113 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 DDX54Q8TDD1 881 aaKnown RBP4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 ISL2Q96A47 359 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 FOXQ1Q9C009 403 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 TMEM59LQ9UK28 342 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 IRAK3Q9Y616 596 aa4.81□□□□□ -1.64
RNU4-61P-201ENST00000411243 DNAJC25-GNG10A0A024R161 153 aa4.8□□□□□ -1.64
RNU4-61P-201ENST00000411243 POM121CA8CG34 1229 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms