RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
RNU2-28P-201ENST00000410457 POLR3KQ9Y2Y1 108 aaPredicted RBP6.08□□□□□ -1.44
RNU2-28P-201ENST00000410457 R3HCC1Q9Y3T6 440 aaKnown RBP6.08□□□□□ -1.44
RNU2-28P-201ENST00000410457 TBX22Q9Y458 520 aa6.08□□□□□ -1.44
RNU2-28P-201ENST00000410457 SNCAIPQ9Y6H5 919 aa6.08□□□□□ -1.44
RNU2-28P-201ENST00000410457 GFRA2O00451 464 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 SMAD7O15105 426 aaKnown RBP6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 SELPP16109 830 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 MAOBP27338 520 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 CDC25BP30305 580 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 MPRIPQ6WCQ1 1025 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 FAM169BQ8N8A8 192 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 ACSBG1Q96GR2 724 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 BTBD6Q96KE9 485 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 CCDC86Q9H6F5 360 aaKnown RBP6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 PCDHB14Q9Y5E9 798 aa6.07□□□□□ -1.44
RNU2-28P-201ENST00000410457 SYNGAP1Q96PV0 1343 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 MEIS3P2A8K0S8 358 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 BCRP11274 1271 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 NID1P14543 1247 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 CASP7P55210 303 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 SETDB1Q15047 1291 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 KIF4BQ2VIQ3 1234 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 LRRFIP1Q32MZ4 808 aaKnown RBP6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 WIPI1Q5MNZ9 446 aaPredicted RBP6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 FBXW10Q5XX13 1052 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 HDXQ7Z353 690 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 LSRQ86X29 649 aaPredicted RBP6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 DTWD1Q8N5C7 304 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 C19orf47Q8N9M1 422 aaKnown RBP6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 KLHDC7BQ96G42 594 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 ACTR10Q9NZ32 417 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 PCDHA4Q9UN74 947 aa6.06□□□□□ -1.44
RNU2-28P-201ENST00000410457 ZNF862O60290 1169 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 GDF11O95390 407 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 ECEL1O95672 775 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 HMGB1P09429 215 aaKnown RBP6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 COL9A3Q14050 684 aaPredicted RBP6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 RASA3Q14644 834 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 C8orf86Q6ZUL3 223 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 PLPPR2Q96GM1 343 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 PSMG3-AS1Q96PY0 264 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 CARD10Q9BWT7 1032 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 ZC3H12CQ9C0D7 883 aaKnown RBP6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 MSRB2Q9Y3D2 182 aa6.05□□□□□ -1.44
RNU2-28P-201ENST00000410457 LOC100289279A0A1B0GTE1 492 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 SHISA8B8ZZ34 492 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 GRIN3BO60391 1043 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 HTR3BO95264 441 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 CTSBP07858 339 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 MLECQ14165 292 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 PDE3AQ14432 1141 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 SDE2Q6IQ49 451 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 LRFN4Q6PJG9 635 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 CYFIP1Q7L576 1253 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 JAZF1Q86VZ6 243 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 TAB3Q8N5C8 712 aaPredicted RBP6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 GALNT11Q8NCW6 608 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 DEPDC7Q96QD5 511 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 SRPK1Q96SB4 655 aaKnown RBP6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 TM9SF2Q99805 663 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 USP26Q9BXU7 913 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 CCDC113Q9H0I3 377 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 SNTG2Q9NY99 539 aa6.04□□□□□ -1.44
RNU2-28P-201ENST00000410457 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 AMPD1P23109 780 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 CD68P34810 354 aaPredicted RBP6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 CDK8P49336 464 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 DGKGP49619 791 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 NLRP12P59046 1061 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 RASSF7Q02833 373 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 PDE4BQ07343 736 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 INPP5AQ14642 412 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 DDR2Q16832 855 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 ZC3H12AQ5D1E8 599 aaKnown RBP6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 KRTAP1-3Q8IUG1 177 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 NLGN1Q8N2Q7 840 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 TMEM40Q8WWA1 233 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 GMIPQ9P107 970 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 PCDHGC5Q9Y5F6 944 aa6.03□□□□□ -1.44
RNU2-28P-201ENST00000410457 ADAM11O75078 769 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 DEAF1O75398 565 aaPredicted RBP6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 CELA2BP08218 269 aaPredicted RBP6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 SLFN14P0C7P3 912 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 HSP90B1P14625 803 aaKnown RBP6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 NCLP19338 710 aaKnown RBP6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 GUCY2CP25092 1073 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 ERVK-24P63145 666 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 FXNQ16595 210 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 FOXD4L6Q3SYB3 417 aaPredicted RBP6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 TMEM201Q5SNT2 666 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 FOXD4L3Q6VB84 417 aaPredicted RBP6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 DMRTC2Q8IXT2 367 aaPredicted RBP6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 CELF2-AS1Q8N7Q2 184 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 ELMO3Q96BJ8 720 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 WDR18Q9BV38 432 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 ADAM30Q9UKF2 790 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 SLC12A7Q9Y666 1083 aa6.02□□□□□ -1.45
RNU2-28P-201ENST00000410457 AOC2O75106 756 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms