RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 GBP3Q9H0R5 595 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 PDE11AQ9HCR9 933 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 MKRN1Q9UHC7 482 aaKnown RBP18.85■□□□□ 0.61
COPS7B-206ENST00000410017 ZMYM6O95789 1325 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 AKR1B15C9JRZ8 316 aaPredicted RBP18.85■□□□□ 0.61
COPS7B-206ENST00000410017 TRIM66O15016 1216 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 CDC27P30260 824 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 SARSP49591 514 aaKnown RBP18.85■□□□□ 0.61
COPS7B-206ENST00000410017 FOXO4P98177 505 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 KRT40Q6A162 431 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 MRPL44Q9H9J2 332 aaKnown RBP18.85■□□□□ 0.61
COPS7B-206ENST00000410017 MAN1B1Q9UKM7 699 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 NFE2L3Q9Y4A8 694 aa18.85■□□□□ 0.61
COPS7B-206ENST00000410017 DDX60Q8IY21 1712 aaKnown RBP18.84■□□□□ 0.61
COPS7B-206ENST00000410017 CAMTA1Q9Y6Y1 1673 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 FOXP2O15409 715 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 KIF5CO60282 957 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 FGAP02671 866 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 TIMM10P62072 90 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
COPS7B-206ENST00000410017 SLC52A2Q9HAB3 445 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 VPS18Q9P253 973 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 ADGRG1Q9Y653 693 aa18.84■□□□□ 0.61
COPS7B-206ENST00000410017 A0A1B0GTH6 734 aa18.83■□□□□ 0.61
COPS7B-206ENST00000410017 H7C1W4 665 aa18.83■□□□□ 0.61
COPS7B-206ENST00000410017 MORC3Q14149 939 aa18.83■□□□□ 0.61
COPS7B-206ENST00000410017 C5P01031 1676 aa18.83■□□□□ 0.61
COPS7B-206ENST00000410017 C4AP0C0L4 1744 aa18.83■□□□□ 0.6
COPS7B-206ENST00000410017 C4BP0C0L5 1744 aa18.83■□□□□ 0.6
COPS7B-206ENST00000410017 ERCC5P28715 1186 aaPredicted RBP18.83■□□□□ 0.6
COPS7B-206ENST00000410017 KARSQ15046 597 aaKnown RBP18.83■□□□□ 0.6
COPS7B-206ENST00000410017 PTPN21Q16825 1174 aa18.83■□□□□ 0.6
COPS7B-206ENST00000410017 CPLX2Q6PUV4 134 aaKnown RBP18.83■□□□□ 0.6
COPS7B-206ENST00000410017 NWD2Q9ULI1 1742 aa18.83■□□□□ 0.6
COPS7B-206ENST00000410017 CIAO1O76071 339 aa18.82■□□□□ 0.6
COPS7B-206ENST00000410017 MAGEA9P43362 315 aa18.82■□□□□ 0.6
COPS7B-206ENST00000410017 KRI1Q8N9T8 703 aaKnown RBP18.82■□□□□ 0.6
COPS7B-206ENST00000410017 FAM71BQ8TC56 605 aa18.82■□□□□ 0.6
COPS7B-206ENST00000410017 CLIC6Q96NY7 704 aa18.82■□□□□ 0.6
COPS7B-206ENST00000410017 DESI2Q9BSY9 194 aa18.82■□□□□ 0.6
COPS7B-206ENST00000410017 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.82■□□□□ 0.6
COPS7B-206ENST00000410017 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
COPS7B-206ENST00000410017 MCM6Q14566 821 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 POSTNQ15063 836 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 TTC39AQ5SRH9 613 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 RASGRP2Q7LDG7 609 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 PLBD2Q8NHP8 589 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
COPS7B-206ENST00000410017 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
COPS7B-206ENST00000410017 EYA2O00167 538 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 ZNF213O14771 459 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 KCNA6P17658 529 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 FMR1Q06787 632 aaKnown RBP eCLIP18.81■□□□□ 0.6
COPS7B-206ENST00000410017 SLC39A6Q13433 755 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 KANK3Q6NY19 840 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 ACBD3Q9H3P7 528 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 YY1AP1Q9H869 796 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 ABCB6Q9NP58 842 aa18.81■□□□□ 0.6
COPS7B-206ENST00000410017 A0A1B0GUL7 405 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
COPS7B-206ENST00000410017 HAND2P61296 217 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 PIP4K2BP78356 416 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 WHAMMP3Q1A5X7 153 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 PNKPQ96T60 521 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 MED4Q9NPJ6 270 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 ANGEL1Q9UNK9 670 aaKnown RBP18.8■□□□□ 0.6
COPS7B-206ENST00000410017 CTAGE9A4FU28 777 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 FECHP22830 423 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 METAP2P50579 478 aaKnown RBP eCLIP18.8■□□□□ 0.6
COPS7B-206ENST00000410017 CCDC51Q96ER9 411 aa18.8■□□□□ 0.6
COPS7B-206ENST00000410017 SOWAHDA6NJG2 315 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 PLCD1P51178 756 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 TRIM29Q14134 588 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 MTF1Q14872 753 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 RAD9BQ6WBX8 426 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 PLCD3Q8N3E9 789 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 ZNF579Q8NAF0 562 aaKnown RBP18.79■□□□□ 0.6
COPS7B-206ENST00000410017 APPBP2Q92624 585 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 IRX2Q9BZI1 471 aaPredicted RBP18.79■□□□□ 0.6
COPS7B-206ENST00000410017 MYO1AQ9UBC5 1043 aa18.79■□□□□ 0.6
COPS7B-206ENST00000410017 PUF60Q9UHX1 559 aaKnown RBP18.79■□□□□ 0.6
COPS7B-206ENST00000410017 TTF2Q9UNY4 1162 aaKnown RBP18.79■□□□□ 0.6
COPS7B-206ENST00000410017 ATP5J2-PTCD1G3V325 749 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 PTCD1O75127 700 aaKnown RBP18.78■□□□□ 0.6
COPS7B-206ENST00000410017 GCP02774 474 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 PBX1P40424 430 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 CASP8Q14790 479 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 HSP90B2PQ58FF3 399 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 PPFIBP1Q86W92 1011 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 SPATA20Q8TB22 786 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 ZNF496Q96IT1 587 aaPredicted RBP18.78■□□□□ 0.6
COPS7B-206ENST00000410017 AIFM3Q96NN9 605 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 VIPAS39Q9H9C1 493 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 FAN1Q9Y2M0 1017 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 WDR17Q8IZU2 1322 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 FOXN1O15353 648 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 PTPREP23469 700 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 TRDNQ13061 729 aa18.78■□□□□ 0.6
COPS7B-206ENST00000410017 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms