RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CTNND1O60716 968 aaKnown RBP17.86■□□□□ 0.45
MCF2L-210ENST00000409954 PRMT2P55345 433 aa17.86■□□□□ 0.45
MCF2L-210ENST00000409954 ARMC5Q96C12 935 aa17.86■□□□□ 0.45
MCF2L-210ENST00000409954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-210ENST00000409954 PDHXO00330 501 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 TBC1D12O60347 775 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 SURF6O75683 361 aaKnown RBP17.85■□□□□ 0.45
MCF2L-210ENST00000409954 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-210ENST00000409954 C17orf99Q6UX52 265 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 SH3BP5LQ7L8J4 393 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 FASTKD5Q7L8L6 764 aaKnown RBP17.85■□□□□ 0.45
MCF2L-210ENST00000409954 SCYL3Q8IZE3 742 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 NSUN4Q96CB9 384 aaKnown RBP17.85■□□□□ 0.45
MCF2L-210ENST00000409954 RAI14Q9P0K7 980 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 LRP2BPQ9P2M1 347 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
MCF2L-210ENST00000409954 HOXD10P28358 340 aa17.84■□□□□ 0.45
MCF2L-210ENST00000409954 RHBDL3P58872 404 aa17.84■□□□□ 0.45
MCF2L-210ENST00000409954 LACTBP83111 547 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-210ENST00000409954 TBC1D9Q6ZT07 1266 aa17.84■□□□□ 0.45
MCF2L-210ENST00000409954 ZNF512BQ96KM6 892 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-210ENST00000409954 TMEM106CQ9BVX2 250 aa17.84■□□□□ 0.45
MCF2L-210ENST00000409954 NOP58Q9Y2X3 529 aaKnown RBP17.84■□□□□ 0.45
MCF2L-210ENST00000409954 DDTLA6NHG4 134 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-210ENST00000409954 PTPRAP18433 802 aa17.83■□□□□ 0.44
MCF2L-210ENST00000409954 PICALMQ13492 652 aa17.83■□□□□ 0.44
MCF2L-210ENST00000409954 TNNI3KQ59H18 835 aa17.83■□□□□ 0.44
MCF2L-210ENST00000409954 NOL10Q9BSC4 688 aaKnown RBP17.83■□□□□ 0.44
MCF2L-210ENST00000409954 DDX4Q9NQI0 724 aaKnown RBP17.83■□□□□ 0.44
MCF2L-210ENST00000409954 FPGT-TNNI3KV9GXZ4 949 aa17.83■□□□□ 0.44
MCF2L-210ENST00000409954 BAG3O95817 575 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 MS4A1P11836 297 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 MCAMP43121 646 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 CAP1Q01518 475 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 TTC39AQ5SRH9 613 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 ITPRIPQ8IWB1 547 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 ZNF384Q8TF68 577 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 AFG3L2Q9Y4W6 797 aa17.82■□□□□ 0.44
MCF2L-210ENST00000409954 LAMB1P07942 1786 aa17.81■□□□□ 0.44
MCF2L-210ENST00000409954 PLCG2P16885 1265 aa17.81■□□□□ 0.44
MCF2L-210ENST00000409954 MOGSQ13724 837 aa17.81■□□□□ 0.44
MCF2L-210ENST00000409954 SLC9C1Q4G0N8 1177 aa17.81■□□□□ 0.44
MCF2L-210ENST00000409954 PRPF38BQ5VTL8 546 aaKnown RBP17.81■□□□□ 0.44
MCF2L-210ENST00000409954 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
MCF2L-210ENST00000409954 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.81■□□□□ 0.441e-7■■■■□ 25.6
MCF2L-210ENST00000409954 SLC45A1Q9Y2W3 748 aa17.81■□□□□ 0.44
MCF2L-210ENST00000409954 ATRNL1Q5VV63 1379 aa17.8■□□□□ 0.44
MCF2L-210ENST00000409954 A0A0G2JLL6 359 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-210ENST00000409954 PPP4CP60510 307 aa17.8■□□□□ 0.44
MCF2L-210ENST00000409954 GPAT2Q6NUI2 795 aa17.8■□□□□ 0.44
MCF2L-210ENST00000409954 PRRT2Q7Z6L0 340 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-210ENST00000409954 ZNF333Q96JL9 665 aa17.8■□□□□ 0.44
MCF2L-210ENST00000409954 PARK7Q99497 189 aaKnown RBP17.8■□□□□ 0.44
MCF2L-210ENST00000409954 OSBPL5Q9H0X9 879 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-210ENST00000409954 CPA4Q9UI42 421 aa17.8■□□□□ 0.44
MCF2L-210ENST00000409954 PTCH2Q9Y6C5 1203 aa17.8■□□□□ 0.44
MCF2L-210ENST00000409954 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
MCF2L-210ENST00000409954 POTEFA5A3E0 1075 aa17.79■□□□□ 0.44
MCF2L-210ENST00000409954 PSMC4P43686 418 aa17.79■□□□□ 0.44
MCF2L-210ENST00000409954 NAA16Q6N069 864 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-210ENST00000409954 DBNDD2Q9BQY9 259 aa17.79■□□□□ 0.44
MCF2L-210ENST00000409954 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
MCF2L-210ENST00000409954 DHX36Q9H2U1 1008 aaKnown RBP17.79■□□□□ 0.44
MCF2L-210ENST00000409954 RFX7Q2KHR2 1363 aa17.79■□□□□ 0.44
MCF2L-210ENST00000409954 FMNL1O95466 1100 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-210ENST00000409954 RLBP1P12271 317 aa17.78■□□□□ 0.44
MCF2L-210ENST00000409954 FOXP4Q8IVH2 680 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-210ENST00000409954 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
MCF2L-210ENST00000409954 SNRKQ9NRH2 765 aa17.78■□□□□ 0.44
MCF2L-210ENST00000409954 PI4KBQ9UBF8 816 aa17.78■□□□□ 0.44
MCF2L-210ENST00000409954 HERC5Q9UII4 1024 aaKnown RBP17.78■□□□□ 0.44
MCF2L-210ENST00000409954 OTOFQ9HC10 1997 aa17.78■□□□□ 0.44
MCF2L-210ENST00000409954 CYP2E1P05181 493 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-210ENST00000409954 SLC4A8Q2Y0W8 1093 aa17.77■□□□□ 0.44
MCF2L-210ENST00000409954 HSP90AB4PQ58FF6 505 aa17.77■□□□□ 0.44
MCF2L-210ENST00000409954 TMED8Q6PL24 325 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-210ENST00000409954 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.44
MCF2L-210ENST00000409954 ARHGAP39Q9C0H5 1083 aa17.77■□□□□ 0.44
MCF2L-210ENST00000409954 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
MCF2L-210ENST00000409954 SRRDQ9UH36 339 aa17.77■□□□□ 0.44
MCF2L-210ENST00000409954 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
MCF2L-210ENST00000409954 EN2P19622 333 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-210ENST00000409954 CAP2P40123 477 aa17.76■□□□□ 0.43
MCF2L-210ENST00000409954 GADL1Q6ZQY3 521 aa17.76■□□□□ 0.43
MCF2L-210ENST00000409954 CERS3Q8IU89 383 aa17.76■□□□□ 0.43
MCF2L-210ENST00000409954 ADGRA2Q96PE1 1338 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 AK9Q5TCS8 1911 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 CYP2C8P10632 490 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 BCRP11274 1271 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 ZAP70P43403 619 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 FCGRTP55899 365 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 CEP85Q6P2H3 762 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 SH3RF3Q8TEJ3 882 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-210ENST00000409954 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-210ENST00000409954 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
MCF2L-210ENST00000409954 CCDC8Q9H0W5 538 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-210ENST00000409954 AATFQ9NY61 560 aaKnown RBP eCLIP17.75■□□□□ 0.43
MCF2L-210ENST00000409954 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 PDE4DIPQ5VU43 2346 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 TRIM75PA6NK02 468 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms